|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G75270.1 | AT | dehydroascorbate reductase 2 | JGI | N/A | IEA |
GO:0006749 | GO-bp | glutathione metabolic process | EnsemblGenomes | N/A | IEA |
GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
GO:0004364 | GO-mf | glutathione transferase activity | EnsemblGenomes | N/A | IEA |
GO:0005515 | GO-mf | protein binding | EnsemblGenomes | N/A | IEA |
GO:0005515 | GO-mf | protein binding | JGI | N/A | IEA |
GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
KOG1422 | KOG | Intracellular Cl- channel CLIC, contains GST domain | JGI | N/A | IEA |
PTHR11260 | Panther | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | JGI | N/A | IEA |
PTHR11260:SF15 | Panther | JGI | N/A | IEA | |
PF02798 | PFAM | Glutathione S-transferase, N-terminal domain | JGI | N/A | IEA |
PWY-2261 | SoyCyc9 | ascorbate glutathione cycle | Plant Metabolic Network | ISS | |
GN7V-63623 | SoyCyc9-rxn | glutathione dehydrogenase (ascorbate) | Plant Metabolic Network | ISS |
Locus | Gene Symbol | Protein Name |
---|---|---|
DHAR4 | DHAR class glutathione S-transferase | |
MDHAR-1b | DEHYDROASCORBATE REDUCTASE 1 gene b | |
DHAR-1b | DHAR class glutathione S-transferase 1 gene a |
Glyma.20g240300 not represented in the dataset |
Glyma.20g240300 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.10g291100 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma20g38440 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.20g240300.1 sequence-type=CDS polypeptide=Glyma.20g240300.1.p locus=Glyma.20g240300 ID=Glyma.20g240300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCTCTCGAGGTTGCTGTTAAGGCTGCTGTTGGGGCTCCAAATGTTCTCGGAGATTGTCCATTTTCCCAAAGGGTCCTCTTAACTTTGGAGGAGAAGAAAATTCCTTACAAACTCCACCTCATCGATCTCAGTAACAAACCCGAATGGTTTTTGGGTGTGAATCCTGAAGGGAAGGTGCCAGTGGTTCTTTTTGATGGCAAATGGGTGGCTGATTCTGATGTAATTGTGGGGATACTAGAGGAAAAGTACCCAGAACCCTCTCTAATCACTCCTCCTGAATTTGCCTCCGTGGGATCAAAGATATTTGGGTCTTTTGTGAGTTTTCTGAAGAGCAAGGATACAAACGATGGAACTGAGCAAGCATTGGTTGCTGAATTGAGTGCCTTGGATGAACATCTCAAGACCCATGGTCCATACATTGCTGGGGAGAAAGTCACTGCTGTTGATCTGAGTTTGGCACCAAAACTGTACCATCTTGTGGTAGCACTGGGCCACTTCAAGAATTGGAATATTCCAGAAAGTTTGGTACATGTGCACAATTACACTAAGCTGCTGTTCTCCCGAGAGTCATTTGAGAAAACAAAGCCTCCAAAGGAGGAATATGTTATTGCTGGATGGGCGCCTAAGGTGAATGCTTGA
>Glyma.20g240300.1.p sequence-type=predicted peptide transcript=Glyma.20g240300.1 locus=Glyma.20g240300 ID=Glyma.20g240300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MALEVAVKAAVGAPNVLGDCPFSQRVLLTLEEKKIPYKLHLIDLSNKPEWFLGVNPEGKVPVVLFDGKWVADSDVIVGILEEKYPEPSLITPPEFASVGSKIFGSFVSFLKSKDTNDGTEQALVAELSALDEHLKTHGPYIAGEKVTAVDLSLAPKLYHLVVALGHFKNWNIPESLVHVHNYTKLLFSRESFEKTKPPKEEYVIAGWAPKVNA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||