SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g238100

Feature Type:gene_model
Chromosome:Gm20
Start:46936719
stop:46939424
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g238100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G27930.2AT JGI N/AIEA
3.1.3.16EC protein-serine/threonine phosphatase JGI N/AIEA
GO:0006470GO-bp protein dephosphorylation JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004722GO-mf protein serine/threonine phosphatase activity JGI N/AIEA
KOG0698 KOG Serine/threonine protein phosphatase JGI N/AIEA
PTHR13832PantherFam PROTEIN PHOSPHATASE 2C JGI N/AIEA
PF00481Pfam Protein phosphatase 2C JGI N/AIEA

Gene model name correspondences to Glyma.20g238100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g38220 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g238100
>Glyma.20g238100.2 sequence-type=CDS polypeptide=Glyma.20g238100.2.p locus=Glyma.20g238100 id=Glyma.20g238100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAAGTCATTCACAACGAAGAAAGGAAGGAGTTCTGATGAATGTAATGGAAGAGAAGCCGCGGAAGCAATGGCAAAGGAAGCCAAAAGAAATCACTTCATGTTGCATAGCTCTGGCACAGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAGAAAAGGCCAGAAAGGAGTTAATCAGGATTGCTGCATTGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGCGGGATTTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTACGAAAGTCAATGCCGCCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTCCACTTCATTCAGATGTTGATTTTGATATAGAGACAGAGAAAAAGCAACACCGGTTTAACTTGTGGAAGCATTCATACTTGAAGACTTGTGCTGCCATTGATCGCGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGTGGAACAACTGCCTTGTCAATTGTTAGACAGGGTGAACTCATTATCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAATAGATTTCAAGCCCAATTTACCTCAAGAGGCACAGCGAATACTTGAGTCCCAAGGACGAGTTTTCTGCTTAGACGACGAGCCTGGGGTGCATAGGGTGTGGTTGCCGGATGAGGAGTTTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAAAGTATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAATATAACCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCCAATCAAGAAGCAGTGGATATTGTGTCTTCAACACCAGACAGAACAGACTCGTCTAAACGTTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGCGAGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCTTCACTTGACCAAGTTGCCACCCCAGAATAG

>Glyma.20g238100.4 sequence-type=CDS polypeptide=Glyma.20g238100.4.p locus=Glyma.20g238100 id=Glyma.20g238100.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAAGTCATTCACAACGAAGAAAGGAAGGAGTTCTGATGAATGTAATGGAAGAGAAGCCGCGGAAGCAATGGCAAAGGAAGCCAAAAGAAATCACTTCATGTTGCATAGCTCTGGCACAGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAGAAAAGGCCAGAAAGGAGTTAATCAGGATTGCTGCATTGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGCGGGATTTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTACGAAAGTCAATGCCGCCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTCCACTTCATTCAGATGTTGATTTTGATATAGAGACAGAGAAAAAGCAACACCGGTTTAACTTGTGGAAGCATTCATACTTGAAGACTTGTGCTGCCATTGATCGCGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGTGGAACAACTGCCTTGTCAATTGTTAGACAGGGTGAACTCATTATCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAATAGATTTCAAGCCCAATTTACCTCAGGCACAGCGAATACTTGAGTCCCAAGGACGAGTTTTCTGCTTAGACGACGAGCCTGGGGTGCATAGGGTGTGGTTGCCGGATGAGGAGTTTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAAAGTATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAATATAACCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTATAG
Predicted protein sequences of Glyma.20g238100
>Glyma.20g238100.2.p sequence-type=predicted peptide transcript=Glyma.20g238100.2 locus=Glyma.20g238100 id=Glyma.20g238100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGHFSSAFNRLAKSFTTKKGRSSDECNGREAAEAMAKEAKRNHFMLHSSGTVNVDGSNNFASVFSRKGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPPSLLCNWQETLSQTPLHSDVDFDIETEKKQHRFNLWKHSYLKTCAAIDRELEQNRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAQRILESQGRVFCLDDEPGVHRVWLPDEEFPGLAMSRAFGDYCVKKYGLISVPEVTHRNITTKDQFVVLATDGVWDVISNQEAVDIVSSTPDRTDSSKRLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLDQVATPE*

>Glyma.20g238100.4.p sequence-type=predicted peptide transcript=Glyma.20g238100.4 locus=Glyma.20g238100 id=Glyma.20g238100.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGHFSSAFNRLAKSFTTKKGRSSDECNGREAAEAMAKEAKRNHFMLHSSGTVNVDGSNNFASVFSRKGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPPSLLCNWQETLSQTPLHSDVDFDIETEKKQHRFNLWKHSYLKTCAAIDRELEQNRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQAQRILESQGRVFCLDDEPGVHRVWLPDEEFPGLAMSRAFGDYCVKKYGLISVPEVTHRNITTKDQFVVLATDGV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo