SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g235400

Feature Type:gene_model
Chromosome:Gm20
Start:46740264
stop:46742934
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g235400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G34910.1AT JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
PTHR24031PantherFam RNA HELICASE JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.20g235400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g37930 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g235400
>Glyma.20g235400.1 sequence-type=CDS polypeptide=Glyma.20g235400.1.p locus=Glyma.20g235400 id=Glyma.20g235400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTGTCATACTCAATGCATACATCGACATCAATTTGGAATTAGATCTGCTGTTTTAAATCCTGAGTTGCCTCAGAATTCTCGCCTCCATATTCTTGAGGAATTCAATGCGGGCCTGTTTGATTATCTAATTGCAACAGATCTTAGCCAGTCAAAGGAAAAGGATGAAGTGCCTAAGGAAAGTAATGTTGGATCATGGAAGTCTAGGCAACATGCTAAGATAAAATTAGATTCTGAATTTGGAGTTGTAAGGGGAATTGACTTTAAAAATGTATACACGGTTATAAACTTTGAAATGCCTGAAAGTGTAGCGGGATATGTACATCGAATTGGACGTACAGGAAGAGCATACAATTCTGGTGCTTCTGTCTCTCTGGTTTCTACGGATGAGATGGATACTTTAGAAGAAATAAGATCTTTTGTTAGGGATGATGAAAACAAAGGCACAAATTCCATTGCTGAGTTTCCCCTCCTCACCAAGAATGCAGTTGAATCTTTACGGTACAGGGCTGAGGATGTTGCAAAGAGTGTAACTAGAATTGCTGTCCGAGAGTCACGAGCCCAGGATTTGAGGAATGAAATTTTGAACTCTGAAAAGTTGAAAGCCCACTTCGAAACTAATCCAAAAGACCTAGATCTACTGAAGCATGACAAAGTTTTGAGCAAGAATCCACCACCTCCGCACCTACGTGATGTGCCTGAGTACCTATTAGACAAACCAACAAAAGAGGCAAGGGAAATGGTCAAGCTTGCAAGGGATCCAAGAGAAAATTAA

>Glyma.20g235400.3 sequence-type=CDS polypeptide=Glyma.20g235400.3.p locus=Glyma.20g235400 id=Glyma.20g235400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAAGAAAATGCAAGTGCAAAGTTGGTTGCTTCCTCATATTCTCCTCCATGTGGGCTTATTCATTTTGGAATTAGATCTGCTGTTTTAAATCCTGAGTTGCCTCAGAATTCTCGCCTCCATATTCTTGAGGAATTCAATGCGGGCCTGTTTGATTATCTAATTGCAACAGATCTTAGCCAGTCAAAGGAAAAGGATGAAGTGCCTAAGGAAAGTAATGTTGGATCATGGAAGTCTAGGCAACATGCTAAGATAAAATTAGATTCTGAATTTGGAGTTGTAAGGGGAATTGACTTTAAAAATGTATACACGGTTATAAACTTTGAAATGCCTGAAAGTGTAGCGGGATATGTACATCGAATTGGACGTACAGGAAGAGCATACAATTCTGGTGCTTCTGTCTCTCTGGTTTCTACGGATGAGATGGATACTTTAGAAGAAATAAGATCTTTTGTTAGGGATGATGAAAACAAAGGCACAAATTCCATTGCTGAGTTTCCCCTCCTCACCAAGAATGCAGTTGAATCTTTACGGTACAGGGCTGAGGATGTTGCAAAGAGTGTAACTAGAATTGCTGTCCGAGAGTCACGAGCCCAGGATTTGAGGAATGAAATTTTGAACTCTGAAAAGTTGAAAGCCCACTTCGAAACTAATCCAAAAGACCTAGATCTACTGAAGCATGACAAAGTTTTGAGCAAGAATCCACCACCTCCGCACCTACGTGATGTGCCTGAGTACCTATTAGACAAACCAACAAAAGAGGCAAGGGAAATGGTCAAGCTTGCAAGGGATCCAAGAGAAAATTAA
Predicted protein sequences of Glyma.20g235400
>Glyma.20g235400.1.p sequence-type=predicted peptide transcript=Glyma.20g235400.1 locus=Glyma.20g235400 id=Glyma.20g235400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MCHTQCIHRHQFGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDEVPKESNVGSWKSRQHAKIKLDSEFGVVRGIDFKNVYTVINFEMPESVAGYVHRIGRTGRAYNSGASVSLVSTDEMDTLEEIRSFVRDDENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKAHFETNPKDLDLLKHDKVLSKNPPPPHLRDVPEYLLDKPTKEAREMVKLARDPREN*

>Glyma.20g235400.3.p sequence-type=predicted peptide transcript=Glyma.20g235400.3 locus=Glyma.20g235400 id=Glyma.20g235400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKENASAKLVASSYSPPCGLIHFGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDEVPKESNVGSWKSRQHAKIKLDSEFGVVRGIDFKNVYTVINFEMPESVAGYVHRIGRTGRAYNSGASVSLVSTDEMDTLEEIRSFVRDDENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKAHFETNPKDLDLLKHDKVLSKNPPPPHLRDVPEYLLDKPTKEAREMVKLARDPREN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo