SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g219500

Feature Type:gene_model
Chromosome:Gm20
Start:45448015
stop:45451771
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g219500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G65650.1AT UCH2 JGI N/AIEA
3.4.19.12EC ubiquitinyl hydrolase 1 JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0004843GO-mf thiol-dependent deubiquitinase JGI N/AIEA
K05610KEGG Ubiquitin system JGI N/AIEA
PTHR10589PantherFam UBIQUITIN CARBOXYL-TERMINAL HYDROLASE JGI N/AIEA
PTHR10589:SF30PantherFam UBIQUITIN CARBOXYL-TERMINAL HYDROLASE JGI N/AIEA
PF01088Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 JGI N/AIEA

Gene model name correspondences to Glyma.20g219500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g36170 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g219500
>Glyma.20g219500.1 sequence-type=CDS polypeptide=Glyma.20g219500.1.p locus=Glyma.20g219500 id=Glyma.20g219500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTTGGTGCACCATTGAGTCCGATCCCGGTGTGTTTACAGAACTCATTCAGCAAATGCAAGTGAAAGGAGTACAGGTTGAGGAACTGTATTCATTGGACCTTGACTCTCTCAACAGCCTTAGGCCTGTTTATGGGTTGATTTTTCTTTTCAAATGGCGTCCAGGAGAAAAGGATGATCGTGTCGTTATCAAAGATCCCAACCCTAACTTGTTTTTTGCTAGTCAGGTAATTAATAATGCTTGTGCTACCCAAGCGATCTTGTCCATTCTTATGAATTCACCAGATATTGATATTGGTCCAGAGCTGACGAAATTGAAAGAATTTACCAAGAATTTCCCTCCTGAGCTCAAAGGTTTAGCCATCAATAACAGTGAGGCCATACGTACAGCCCATAATAGCTTTGCCAGGCCAGAACCTTTTGTTCCTGAAGAGCAAAAGGTTGCTAGCAAAGATGATGATGTTTACCATTTCATAAGCTATCTACCTGTTGATGGGGTACTATATGAGCTTGATGGATTAAAGGAGGGTCCCATCAGCCTTGGTCAGTGCTCTGGTGGGCAAGGTGATATGGAATGGCTGAAGATGGTGCAGCCCGTGATCCAGGAACGCATTGAAAGGTATTCCCAAAGTGAAATAAGATTTAATCTCCTGGCAGTCATCAAGAACAGGAAAGAGATGTATACTGCTGAGCTGAAGGAACTTCAGAAGAGGAGGGAGCGCATTTTGCAGCAGCTAGCAGCATCAAAGTCAGACAGACTTGTGGACAATAGCAGTTTTGAGGCACTGAACAATTCTCTCTCTGAAGTGAATGCTGGGATTGAAGCAGCTACTGAGAAGATCTTGATGGAGGAAGAAAAATTCAAAAAATGGAGAACAGAAAATATTCGGAGGAAACACAACTACATACCCTTTTTGTTTAACTTTCTAAAGATTCTCGCTGAGAAGAAGCAGCTGAAGCCCCTCATTGAGAAGGCCAAGCAGAAAACAAGCAGCCCTCGGTGA
Predicted protein sequences of Glyma.20g219500
>Glyma.20g219500.1.p sequence-type=predicted peptide transcript=Glyma.20g219500.1 locus=Glyma.20g219500 id=Glyma.20g219500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNSLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILMNSPDIDIGPELTKLKEFTKNFPPELKGLAINNSEAIRTAHNSFARPEPFVPEEQKVASKDDDVYHFISYLPVDGVLYELDGLKEGPISLGQCSGGQGDMEWLKMVQPVIQERIERYSQSEIRFNLLAVIKNRKEMYTAELKELQKRRERILQQLAASKSDRLVDNSSFEALNNSLSEVNAGIEAATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSPR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo