SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g198400

Feature Type:gene_model
Chromosome:Gm20
Start:43561107
stop:43580988
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g198400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G25120.1AT ATSRS2,SRS2 JGI N/AIEA
3.6.4.12EC DNA helicase JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
KOG2108 KOG 3'-5' DNA helicase JGI N/AIEA
PTHR11070PantherFam UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER JGI N/AIEA
PF13245Pfam AAA domain JGI N/AIEA
PF13538Pfam UvrD-like helicase C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.20g198400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.20g198400
>Glyma.20g198400.3 sequence-type=CDS polypeptide=Glyma.20g198400.3.p locus=Glyma.20g198400 id=Glyma.20g198400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGAGCAGCAAAGTAGCCGAATCAGCGTCTTTTTCAGTGCTTCGAAGCCCCTTCTTCCTAGAAAAAGGCCTTCTGATTCCTCTCCCCTTCACCCTCACCGAATCAAGAGTGCCGGTGATGTTGCTTCGGTTTCTGTTGCGAAGAGAGTTCCTCTTGCGGAAGTGCCGCTGAATAGGCTCAATGCAATTGGGAGTGTTCATGGTCCGTCGCCTGATGCAATTCACAGCAGTTTCAGTGCAAGGACTGTGTCTGTTCCTGCAGTTGGTTCTGCGGATGAGAACCTGTGTCGATCTCTTTTTGAAACTCCAAGGAGAGAACCTGAAGGCTCTAAACCTAAACAGCTGGATTGTTTTTCAACGACTGGTCTCCTTGACGACGATTTTGATGACTCTTTTTTGGAGCAAATTGACATTCTGTGTGAGCAGAAATCTGCAGAGCAGCAGGCGGATCGTAGCAGTGACGAGAAACTTTCGAGCAAGAGTAATGTTGTTGGTGATGTTAATCTGAGTTCAGAATCTGGTACTGTTTCTGAGGGTATAGGAAACGGTCACCTGCTTAGCTCTGGGATTGAGCTAGATAGTAGAGAAGAGGAAGTGGATTCAAGCTGGCGAGATTTACTCAATAGCACCATGCCTGAGGAATATTTGAAATACTTAAAGTCTTTAAATGACAGGCAAAGAGAAGCAGCTTGCACTGATATTTCAACCCCTTTAATGATTGTAGCTGGTCCAGGAAGTGGCAAGACATCAACGATGGTAGGGCGTGTATTGATGCTGCTCAATGAGGGCATTAGTCCATCAAACATTCTTGCAATGACATTTACTACAGCAGCTGCTTCTGAAATGAGAGAACGTATAGGAGCTATAGCTGGGAAGGCAACAGCTAAAGAACTTACTATCAGTACTTTTCATTCATTTTCCTTGCAGCTTTGTCGTTCACATGGAGAAAAGTTAGGTCGTACATCTGAATTCTTAATATATGGACAGGGGCAACAGCGAAATGCAATTATTGAGGCCATCCGATTATTAGAAATTGGAAAGAGTGAAAATAAAGATGGTGCATTATTAATTGGTGAATTGTCCAATAGTCTAAATAATCCTAAACAGTTCAAGGATAAGGCAAAGAAATGGCAAAAGTTTGTGGCTCAGGCCAAAGCTTCGGGAAGAACTTCTGCAGAATATCGCAAAATGGGCAACGAAATTGGAGCCGCAATTCTTAAGAATTACAACAACATATTAAAATCTTGTAATGCTCTGGATTATCATGACTTGATCAGCTGTTCTGTGAAGCTACTTAGTGATTTTCCTGAAGTTTTCAAAGAATGTCAGGATTCATGGAAAGCTATTGTTATAGATGAGTTCCAAGATACTAGTGCCATGCAATACAAGTTTCTAAAGATGCTTGCATCTCATCATAAAATAACAATTGTTGGTGATGATGATCAGTCTATTTACAGTTTCAATGGAGCTGACATTTCTGGATTTATTTCCTTTCGCAATGATTTTCCAAACTACAAAGAGATTAGGCTTAACAAAAACTACCGATCCACACGTTGCATTGTTGAGGCCGCATCTTCTCTTATTCAAAATAATTCCAAGCGATGTCAGTTGAAGAATGTTCTTACTGATAACTCTTCTGGATCCAAGATAGTTATGAAGGAGTGTCACAATGAGGATGCACAATGCGCATTTGTTGTTGACAAAATCATAGAAATTTCATCAAATTATTCTGCAGCTAACTGTTGTTATGGCAACATTGCAATTCTCTACCGTAGGCAGATATCAGGTAAAGCCTTCCAAATGGCTTTCCGTGATAGGAAAATACCATTTAACATTCATGGTGTGGCTTTTTACAGAAAAAAGGTAGTCAGAACTATCATGGCCATGCTTCGAACAGCACTGCCTGGTTGTGATGATGGGTCATATAGTCGTGTCTTCAAGGCTTTAATGCCTTTGGAGAAAGATAAAAAAAAGAGGATAATTGACCATATCAACAAAATATCAACAATTAGAAGATGTAGCTTCTTGTCAGCTGCCTCTGACATCTTTAGTGCAAAGATTTCTGGTACCTTTAAAAGGAGTGAGCTTACCCATGGAAGGAAGATTTTAATGACACTAGAGATGATATCAAAACTTATTCAGAGGGAAAAATCGATCTCAGCTATCATATCTTCTGTGGCAAACATGATACCCGAGAAATACCTTCTTGAGCAACGAGCAGTCGTTGATGTTGATGGAGGGACATTGCTGAATGAAGACTATGACATCAGATCTGTTCTTCAATACCTGTTAGATGACGTCTCTGAGTTTCTATCCACTAAATTAGTTGAAGTAAAAGAGGAAAGGGAAATATCTGAAGATAAGGGCTGCATTTTTGTTCTAAAAGCATTCATTGATTATTTACTTGAGCGTGAGAAAGAAAATTTTGGTGCTCGGAGGAAGGACAATGAAAACTCTGTGACGTTGACTACCATTCATCAGGCAAAAGGTTTAGAGTGGGATGTTGTCTTCATAGTTAAGGCAAATGACTCTGAGATCCCTCTATTACATGATTTCAAGGGCACCGTAAAGGACACTGCAGCCTTACTTGAGGAAGAAAGACGATTATTATATGTTGCAATGACTCGTGCTCGGGAGAAGCTTTTTATTCTTCATGTTATGATGGACTCAAACTGGCAGATGCTTCAACCTTCAAGATTTTTGAAAGAAATCCCTCGTCATCTTACAGAAGTTCAGGGTGAAATAAGTTTTCAAGAACTACTGATAAAGCAAGAAGCTCTTCAAAAGGAAACTGCCCATTGTACCACTGACTTGTTGATAAAAGAGAAACAATCTGAAGCAGATGTGATCCCTATGCCTCATGAAATACTTGATAATCATTCTAGTGAGACTTCCAATGAGCTTGCACAATTTGCAGAGGCAAACAATAGAAATGATTTCTTAAGAAGATTTAGTGTTGAGAACAGGTCTATTGTTTCCCATTTATTCCATCAGTGGGCCAAAAAGAAAGCATTTCAAGATCCAAAGAGATTGCTTGACAAGGTTAGTTTTGTAATTGATGAACGCCTCAGACAGAAGAGAAACAAAAACAAGGATTTGTTGAATACATTAAAATCTTGTTTAAGCTGTGATGAAGCATTTCAGTATGCTCAATATGTTTTGAGATGGGAGCAGATTCCTGCTGATAAACGTGCTCATCTTATGAGAGAAAAACAGGAACATTTCCTGAAATTAAAGATTGAGAATGCAATGGGTTCGGCAACACCAACTGACAAGCAGATTTCATATTTGAAAAAACTGGGTTGCACCGCAATCCCTACCTCCCGCCTCCATGCATCTCATCTTATTGAGCAATTCAAATCATTGTAA
Predicted protein sequences of Glyma.20g198400
>Glyma.20g198400.3.p sequence-type=predicted peptide transcript=Glyma.20g198400.3 locus=Glyma.20g198400 id=Glyma.20g198400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEQQSSRISVFFSASKPLLPRKRPSDSSPLHPHRIKSAGDVASVSVAKRVPLAEVPLNRLNAIGSVHGPSPDAIHSSFSARTVSVPAVGSADENLCRSLFETPRREPEGSKPKQLDCFSTTGLLDDDFDDSFLEQIDILCEQKSAEQQADRSSDEKLSSKSNVVGDVNLSSESGTVSEGIGNGHLLSSGIELDSREEEVDSSWRDLLNSTMPEEYLKYLKSLNDRQREAACTDISTPLMIVAGPGSGKTSTMVGRVLMLLNEGISPSNILAMTFTTAAASEMRERIGAIAGKATAKELTISTFHSFSLQLCRSHGEKLGRTSEFLIYGQGQQRNAIIEAIRLLEIGKSENKDGALLIGELSNSLNNPKQFKDKAKKWQKFVAQAKASGRTSAEYRKMGNEIGAAILKNYNNILKSCNALDYHDLISCSVKLLSDFPEVFKECQDSWKAIVIDEFQDTSAMQYKFLKMLASHHKITIVGDDDQSIYSFNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNSKRCQLKNVLTDNSSGSKIVMKECHNEDAQCAFVVDKIIEISSNYSAANCCYGNIAILYRRQISGKAFQMAFRDRKIPFNIHGVAFYRKKVVRTIMAMLRTALPGCDDGSYSRVFKALMPLEKDKKKRIIDHINKISTIRRCSFLSAASDIFSAKISGTFKRSELTHGRKILMTLEMISKLIQREKSISAIISSVANMIPEKYLLEQRAVVDVDGGTLLNEDYDIRSVLQYLLDDVSEFLSTKLVEVKEEREISEDKGCIFVLKAFIDYLLEREKENFGARRKDNENSVTLTTIHQAKGLEWDVVFIVKANDSEIPLLHDFKGTVKDTAALLEEERRLLYVAMTRAREKLFILHVMMDSNWQMLQPSRFLKEIPRHLTEVQGEISFQELLIKQEALQKETAHCTTDLLIKEKQSEADVIPMPHEILDNHSSETSNELAQFAEANNRNDFLRRFSVENRSIVSHLFHQWAKKKAFQDPKRLLDKVSFVIDERLRQKRNKNKDLLNTLKSCLSCDEAFQYAQYVLRWEQIPADKRAHLMREKQEHFLKLKIENAMGSATPTDKQISYLKKLGCTAIPTSRLHASHLIEQFKSL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo