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Report for Sequence Feature Glyma.20g178400

Feature Type:gene_model
Chromosome:Gm20
Start:41542889
stop:41549195
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g178400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G52260.2AT JGI N/AIEA
5.4.99.28EC tRNA pseudouridine32 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
PTHR11079PantherFam CYTOSINE DEAMINASE FAMILY MEMBER JGI N/AIEA
PF00849Pfam RNA pseudouridylate synthase JGI N/AIEA

Gene model name correspondences to Glyma.20g178400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g31860 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g178400
>Glyma.20g178400.1 sequence-type=CDS polypeptide=Glyma.20g178400.1.p locus=Glyma.20g178400 id=Glyma.20g178400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACGAGCCGTAAGAAATTTGGAATTCCTTGGCCTGAATGCAACGACGGTCTGTCCTACGACGACGTCGTTCGAGCCTCTGATGCCGGGGCGACACTCATAGAGTTTTACTCCACCAAGTACAAGAGTTCTGCTCCCTTACAAGGTTGGTTGCAGCGAATAAAAAGTGGGCAGATAACAGTTGATGGAGGAGTTGTTACTGATTCTAACACAGTCCTCAGAGTTGGATCAAAGCTAATCTATCATAGACTTCCATGGAAGGAGCCAGATGCACCGCACATGATCGACGTCTTATATGAAGATGATGACATGATTGCTCTAAATAAACCGTCTGGCCTGCAAGTTTTGCCTGGAGGTCTCTACCAGCAAAGGACAATTTTAACACAGCTTCAATGGGAAGCCAACAATCAGGGTACCTGTGAAATGCACAAAAGGCTGCATCCTGTTCCCGTACATCGCCTAGGGAGGGGAACTTCAGGAATTTTATTATGTGCGAAGACAAAACTAGCCAGAGCTCGTCTTGCATCTCATTTTGCTGACGGAACTTCTCACGTTGGAGGAAAAAGAGATACAAAGCAGGAACTTGGGAAGATTGCAAAGATGTACCGAGCTCTTGTGAGTGGGATAGTTGAGAATGACAAGGTGACTATTAATCAACCAATTGGAATAGTAAAATATCCTGGTGTTGCTAAAGGGTTATACGTTGCTTCTGAATCAGGAAAACCAGCACTCAGTGTAGTGGACATTCTAGAGACGAACATACAAGAAAACAGCACGTTGGTCCAGGTTAAGATTCAGTCAGGACGGCCTCATCAGATCCGCATTCATCTCTCTTTCATAGGGCATCCTCTGTTAGGTGATCCGCTTTATGGTGTTGGTGGGCAACCTAAATGCTTAGATTGTGACTTTGTAGATGAGAGTTTTGCTGAAGATGGGGGTTATCAGAGACCTACGAAACCAGTTCCCGGAGATTGTGGGTATTACTTGCATGCACATAAATTGGTTCTCTCTCATCCGACAACTAACGAGTTAATTGAAATTATTGCACCCCTTCCTTCTGCCCTCCACACAGCAGAAGAGGCTAAGGAAATTGCTATCATGCAGCAGACTGCTTAA
Predicted protein sequences of Glyma.20g178400
>Glyma.20g178400.1.p sequence-type=predicted peptide transcript=Glyma.20g178400.1 locus=Glyma.20g178400 id=Glyma.20g178400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTSRKKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITVDGGVVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQRTILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSHVGGKRDTKQELGKIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGKPALSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDFVDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEAKEIAIMQQTA*






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