SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g173400

Feature Type:gene_model
Chromosome:Gm20
Start:41068306
stop:41071963
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g173400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G34270.1AT JGI N/AIEA
2.4.2.41EC xylogalacturonan beta-1,3-xylosyltransferase JGI N/AIEA
KOG1021 KOG Acetylglucosaminyltransferase EXT1/exostosin 1 JGI N/AIEA
PTHR11062PantherFam EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED JGI N/AIEA
PTHR11062:SF60PantherFam EXOSTOSIN DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF03016Pfam Exostosin family JGI N/AIEA

Gene model name correspondences to Glyma.20g173400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g31360 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g173400
>Glyma.20g173400.1 sequence-type=CDS polypeptide=Glyma.20g173400.1.p locus=Glyma.20g173400 id=Glyma.20g173400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTGTGATCGCGGCAAAGCCCAACAAAAACCCCTCCTTATACGTCCCCAAGCTCTTCCTCCTCTGCACCCTCTTCTCCATTCTCTCCCTCGCCCTCTTCCTCTTCCTCATCTTCCCCACCGCCACAACAACAACCACCCTCCACCCTTCTCTCTCTCCATTCTCCTCTTCCACAATCAACGTCTACGTCGCCGACCTCCCTCGATCCCTCAACTACGCCCTCCTCCACACCTACTGGTCCTCTTTCTCCGATTCCCGTCTCCCCACCGATGCCGATCACACCACTCCCCCTTCCTCCCTCCATCAGACGGCTAAGATTCCCCCTTACCCCGAGAACCCACTCATCAAACAGTACAGCGCCGAGTACTGGATCACGGGCGACCTCATGACCCCTCCCCAACACCGCGCCACCTCCTTCGCGAAGCGCGTCCTCGACCCGCTTCTCGCCGACGTCGTTTTCGTCCCCTTCTTCGCCACGCTCAGCGCCGAAATGCAGCTCGGCGCCAACAAAGGCGCCTTCAGAAAGAAGCACGACAACGACGATTACAAGCGGCAGAGGCAGGTCATGGACGCCGTTAAAAACACCCATGCCTGGAACCGCTCCGGCGGACGTGACCACGTGTTTGTGCTAACCGACCCGGTGGCGATGTGGCATGTCAAGGACGAGATTGCCCCTGCTGTTCTGCTTGTTGTGGATTTTGGCGGTTGGTACCGGCTTGACTCCCGAGGTGGTTCAAACTGTAGCGAGAGTGATGTGATTCCGCACACGCAAGTTTCTGTGATTAAAGATGTGATTGTGCCGTACACACATCTGCTGCCCAGGTTGGACTTGTCGGATAACAAGGAGCGGCACCAGCTTCTGTATTTTAAAGGAGCTAAACATAGGCACCGGGGAGGTATAATCAGAGAGAAGTTATGGGATCTATTGGTTAGTGAACCTGGTGTTATAATGGAGGAAGGTTTCCCTAATGCAACTGGGCGAGAACAATCAATAAAAGGGATGCAAACATCAGAGTTTTGCCTGCATCCAGCTGGGGATACACCCACTTCATGCCGACTTTTTGATGCAATTCAAAGTCTTTGTATACCTGTCATTGTCAGCGACAACATTGAGCTTCCATTTGAAGGTATGGTGGATTATGCAGAATTTTCTGTCTTCGCAGCAGTTAGTGATGCCCTGAAACCAAGCTGGCTAGTCAGTCATCTTCAAAGCTTTTCAAAAGAGCAGAAAGACAGATTCCGCCAAAATATGGCTCGGGTACAGCCCATCTTTGTCTATGATAATGGCCATCCAGGTGGTATTGGACCAATACCTGCGGATGGTGCAGTGAATCATATATGGAAGAAAGTTCACCAAAAACTGCCAATGATAAAAGAAGCCATAATTCGAGAGAGAAGAAAACCACCTGGTGTTTCAGTTCCACGGCGTTGTCATTGTACTTGA
Predicted protein sequences of Glyma.20g173400
>Glyma.20g173400.1.p sequence-type=predicted peptide transcript=Glyma.20g173400.1 locus=Glyma.20g173400 id=Glyma.20g173400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPVIAAKPNKNPSLYVPKLFLLCTLFSILSLALFLFLIFPTATTTTTLHPSLSPFSSSTINVYVADLPRSLNYALLHTYWSSFSDSRLPTDADHTTPPSSLHQTAKIPPYPENPLIKQYSAEYWITGDLMTPPQHRATSFAKRVLDPLLADVVFVPFFATLSAEMQLGANKGAFRKKHDNDDYKRQRQVMDAVKNTHAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAVLLVVDFGGWYRLDSRGGSNCSESDVIPHTQVSVIKDVIVPYTHLLPRLDLSDNKERHQLLYFKGAKHRHRGGIIREKLWDLLVSEPGVIMEEGFPNATGREQSIKGMQTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYAEFSVFAAVSDALKPSWLVSHLQSFSKEQKDRFRQNMARVQPIFVYDNGHPGGIGPIPADGAVNHIWKKVHQKLPMIKEAIIRERRKPPGVSVPRRCHCT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo