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Report for Sequence Feature Glyma.20g171700

Feature Type:gene_model
Chromosome:Gm20
Start:40903136
stop:40915918
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g171700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G34150.1AT JGI N/AIEA
4.2.1.70EC pseudouridylate synthase JGI N/AIEA
5.4.99.12EC tRNA pseudouridine38-40 synthase JGI N/AIEA
5.4.99.45EC tRNA pseudouridine38/39 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
K01855KEGG Transfer RNA biogenesis JGI N/AIEA
KOG2554 KOG Pseudouridylate synthase JGI N/AIEA
PTHR11142PantherFam PSEUDOURIDYLATE SYNTHASE JGI N/AIEA
PTHR11142:SF5PantherFam TRNA PSEUDOURIDINE(38/39) SYNTHASE JGI N/AIEA
PF01416Pfam tRNA pseudouridine synthase JGI N/AIEA

Gene model name correspondences to Glyma.20g171700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g31161 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g171700
>Glyma.20g171700.1 sequence-type=CDS polypeptide=Glyma.20g171700.1.p locus=Glyma.20g171700 id=Glyma.20g171700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACGACGCAACTTAGCGATACGGAACTCATAGCCACCTTGCAAGCCAGGGCCAAGGAATTAGAAGCTGAGAATGCAAAGCTATTATCCCAACTTGCTGATTGCCGCTGTCATGAGATGGAGAAAAAATTGCATATCCCTGATGAGAAAGGCAGGGAATCAAAAAAAGGCAACAGGAAATCTGAAGAGAAGATAGAGAAAATGCCAGGCTATAACACAAGGTTTATGAGTCATCATAGCAAGAGATATGTAGCTTTAAAAGTCACGTACTTTGGAAAAAGGTTTTATGGTTTTGCTTCAGAGGCACAAATGGAACCAACTGTTGAGTCTGAACTTTTTAAAGCTTTTGAGAAAACAAGGCTATTGGTTGGTGATAAGAAGGAGTCACAGTATTCAAGATGTGGTAGAACAGACAAAGGGGTTTCCTCTGTTGGACAAGTGATAGCTCTTTTCCTAAGATCAAACCTCAAGATATCTGCAACAAATAATGGAAATTCTGGAGTTGTTTTGGATGAGCAACATGAAGGGGAAATAGATTATGTTGGGGTGCTAAATCGAGTCCTTCCAAATGACATTAGGATTATGGGCTGGTGTCCTGCTCCTGTTGATTTCCATGCAAGGTTCAGCTGTTTAAGCAGGGAGTATAAATATTTCTTTTGGAAAGAAAACTTGAACATCCCGGCCATAGAAGTTGCTGGAAACAAACTTGTAGGAGAACATGACTTTAGAAACTTCTGTAAAATGGATGCAGCAAATGTGCACAACTATAGGCGGTGCATCACATTGTTTGAGATTTCTTCTACAGATGTGAGGTACAATGATAATCAACTTTGGGTGATTAAAATAAGAGGTAGTGCTTTTCTATGGCATCAGGTTCGCTGCATGGTTGCTGTCCTATTCATGGTTGGCAAAGGTCTTGAATCTCCAAATGTGATTGATATGCTACTGGACACTTCTAGAATCCTAAGGAAACCCCAATACACTATGGCTTCAGAGGTTCCATTGGTTCTTCAGTCCTGTGAATTTGACAACATTAAGTTTATGTGTTCATCAGATGCGGGAGAAGCGCTGCGTGTACACTTGGTGAATGAATGCCAAATTTACCAGCTTCAAGCTGCAATCTTTCATGAAGCTCTTCTAAATTGCGTGCCTCTATCAAATGATCAAAGCTTGCTGCCTTTTCAAGGATCCAAGAAGAAAGTTTCCCATGTCCCTCTTATGTCACGACCAACTGAGCCATCATATGAAGAACGCCGAGCCAAACTCAACACAATTGCATGA

>Glyma.20g171700.3 sequence-type=CDS polypeptide=Glyma.20g171700.3.p locus=Glyma.20g171700 id=Glyma.20g171700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGTCATCATAGCAAGAGATATGTAGCTTTAAAAGTCACGTACTTTGGAAAAAGGTTTTATGGTTTTGCTTCAGAGGCACAAATGGAACCAACTGTTGAGTCTGAACTTTTTAAAGCTTTTGAGAAAACAAGGCTATTGGTTGGTGATAAGAAGGAGTCACAGTATTCAAGATGTGGTAGAACAGACAAAGGGGTTTCCTCTGTTGGACAAGTGATAGCTCTTTTCCTAAGATCAAACCTCAAGATATCTGCAACAAATAATGGAAATTCTGGAGTTGTTTTGGATGAGCAACATGAAGGGGAAATAGATTATGTTGGGGTGCTAAATCGAGTCCTTCCAAATGACATTAGGATTATGGGCTGGTGTCCTGCTCCTGTTGATTTCCATGCAAGGTTCAGCTGTTTAAGCAGGGAGTATAAATATTTCTTTTGGAAAGAAAACTTGAACATCCCGGCCATAGAAGTTGCTGGAAACAAACTTGTAGGAGAACATGACTTTAGAAACTTCTGTAAAATGGATGCAGCAAATGTGCACAACTATAGGCGGTGCATCACATTGTTTGAGATTTCTTCTACAGATGTGAGGTACAATGATAATCAACTTTGGGTGATTAAAATAAGAGGTAGTGCTTTTCTATGGCATCAGGTTCGCTGCATGGTTGCTGTCCTATTCATGGTTGGCAAAGGTCTTGAATCTCCAAATGTGATTGATATGCTACTGGACACTTCTAGAATCCTAAGGAAACCCCAATACACTATGGCTTCAGAGGTTCCATTGGTTCTTCAGTCCTGTGAATTTGACAACATTAAGTTTATGTGTTCATCAGATGCGGGAGAAGCGCTGCGTGTACACTTGGTGAATGAATGCCAAATTTACCAGCTTCAAGCTGCAATCTTTCATGAAGCTCTTCTAAATTGCGTGCCTCTATCAAATGATCAAAGCTTGCTGCCTTTTCAAGGATCCAAGAAGAAAGTTTCCCATGTCCCTCTTATGTCACGACCAACTGAGCCATCATATGAAGAACGCCGAGCCAAACTCAACACAATTGCATGA

>Glyma.20g171700.6 sequence-type=CDS polypeptide=Glyma.20g171700.6.p locus=Glyma.20g171700 id=Glyma.20g171700.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACGACGCAACTTAGCGATACGGAACTCATAGCCACCTTGCAAGCCAGGGCCAAGGAATTAGAAGCTGAGAATGCAAAGCTATTATCCCAACTTGCTGATTGCCGCTGTCATGAGATGGAGAAAAAATTGCATATCCCTGATGAGAAAGGCAGGGAATCAAAAAAAGGCAACAGGAAATCTGAAGAGAAGATAGAGAAAATGCCAGGCTATAACACAAGGTTTATGAGTCATCATAGCAAGAGATATGTAGCTTTAAAAGTCACGTACTTTGGAAAAAGGTTTTATGGTTTTGCTTCAGAGGCACAAATGGAACCAACTGTTGAGTCTGAACTTTTTAAAGCTTTTGAGAAAACAAGGCTATTGGTTGGTGATAAGAAGGAGTCACAGTATTCAAGATGTGGTAGAACAGACAAAGGGGTTTCCTCTGTTGGACAAGTGATAGCTCTTTTCCTAAGATCAAACCTCAAGATATCTGCAACAAATAATGGAAATTCTGGAGTTGTTTTGGATGAGCAACATGAAGGGGAAATAGATTATGTTGGGGTGCTAAATCGAGTCCTTCCAAATGACATTAGGATTATGGGCTGGTGTCCTGCTCCTGTTGATTTCCATGCAAGGTTCAGCTGTTTAAGCAGGGAGTATAAATATTTCTTTTGGAAAGAAAACTTGAACATCCCGGCCATAGAAGTTGCTGGAAACAAACTTGTAGGAGAACATGACTTTAGAAACTTCTGTAAAATGGATGCAGCAAATGTGCACAACTATAGGCGGTGCATCACATTGTTTGAGATTTCTTCTACAGATGTGAGGTACAATGATAATCAACTTTGGGTGATTAAAATAAGAGGTAGTGCTTTTCTATGGCATCAGGTTCGCTGCATGGTTGCTGTCCTATTCATGGTTGGCAAAGGTCTTGAATCTCCAAATGTGATTGATATGCTACTGGACACTTCTAGAATCCTAAGGAAACCCCAATACACTATGGCTTCAGAGGTTCCATTGGTTCTTCAGTCCTGTGAATTTGACAACATTAAGTTTATGTGTTCATCAGATGCGGGAGAAGCGCTGCGTGTACACTTGGTGAATGAATGCCAAATTTACCAGCTTCAAGCTGCAATCTTTCATGAAGCTCTTCTAAATTGCGTGCCTCTATCAAATGGTCCTGCAAATGCGTTTGCAAATTACTTCCCAATTACTTTGCTTTTATTTATAGTGATCTATTATGCTGATAGCCCTTCCTTTTCCAGATCAAAGCTTGCTGCCTTTTCAAGGATCCAAGAAGAAAGTTTCCCATGTCCCTCTTATGTCACGACCAACTGA
Predicted protein sequences of Glyma.20g171700
>Glyma.20g171700.1.p sequence-type=predicted peptide transcript=Glyma.20g171700.1 locus=Glyma.20g171700 id=Glyma.20g171700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTTQLSDTELIATLQARAKELEAENAKLLSQLADCRCHEMEKKLHIPDEKGRESKKGNRKSEEKIEKMPGYNTRFMSHHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYEERRAKLNTIA*

>Glyma.20g171700.3.p sequence-type=predicted peptide transcript=Glyma.20g171700.3 locus=Glyma.20g171700 id=Glyma.20g171700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSHHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYEERRAKLNTIA*

>Glyma.20g171700.6.p sequence-type=predicted peptide transcript=Glyma.20g171700.6 locus=Glyma.20g171700 id=Glyma.20g171700.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTTQLSDTELIATLQARAKELEAENAKLLSQLADCRCHEMEKKLHIPDEKGRESKKGNRKSEEKIEKMPGYNTRFMSHHSKRYVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNNGNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEALLNCVPLSNGPANAFANYFPITLLLFIVIYYADSPSFSRSKLAAFSRIQEESFPCPSYVTTN*






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