Report for Sequence Feature Glyma.20g148900
| Feature Type: | gene_model |
| Chromosome: | Gm20 |
| Start: | 38727574 |
| stop: | 38732402 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
|
Annotations for Glyma.20g148900
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT3G22740.1 | AT |
HMT3 |
JGI | N/A | IEA |
| 2.1.1.10 | EC |
homocysteine S-methyltransferase |
JGI | N/A | IEA |
| K00547 | KEGG |
Cysteine and methionine metabolism |
JGI | N/A | IEA |
| KOG1579 |
KOG |
Homocysteine S-methyltransferase |
JGI | N/A | IEA |
| PTHR21091 | PantherFam |
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED |
JGI | N/A | IEA |
| PF02574 | Pfam |
Homocysteine S-methyltransferase |
JGI | N/A | IEA |
Proteins Associated with Glyma.20g148900
| Locus | Gene Symbol | Protein Name |
|---|
| | HMT | homocyteine S-methyltransferase |
Gene model name correspondences to Glyma.20g148900 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma20g28720 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.20g148900
>Glyma.20g148900.2 sequence-type=CDS polypeptide=Glyma.20g148900.2.p locus=Glyma.20g148900 id=Glyma.20g148900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGTTAGAAGGGAAGGAAACGCCGTCGTTTATGAGGGATTTTCTCGATAAGTGTGGTGGCTGCGCCGTTATTGACGGTGGTTTTGCCACTGAACTTGAAAGGCATGGGGCGGACCTCAATGACGAACTCTGGAGTGCCAAATGCCTTATTAGCTCCCCACATCTTGTCCGAAGGGTTCACCTAGATTACCTCGATGCAGGAGCAAACATAATATTAACAGCATCTTATCAGGCCACTATTCAAGGTTTTGAGGCCAAAGGGTTCTCTAGAGAAGAAGGTGAAACTATGCTTAGAAGAAGTGTGGAGATTGCACGTGAGGCACGAGAAATTTATTATGATAGGTGCACCAAAGATTCTTCTGACTTTATGAGAGATGAAAGATATAGGAAACGTCCCATTTTAATTGCAGCTTCTGTGGGAAGCTATGGAGCGTATTTGGCTGATGGCTCTGAATATGTTGGGGACTATGGTGATGCAGTTACTGTCCAGACACTGAAAGATTTTCACAGGGAAAGAGTAAAGATTCTTGTTGAGGCTGGTGCTGACTTAATAGCCTTTGAAACAATTCCAAATAAGCTGGAGGCACAGGCTTATGCTGAACTTCTCGAGGAAGAAGGCATAGAAACTCCTGCGTGGTTTTCTTTTAGTTGTAAGGATGAAAGCAATGTGGTTAGTGGTGACTCTATCTTTGAATGCGCTTCAATAGCTGATTCATGCAGACAAGTTGTTGCGGTTGGAGTTAATTGTACTGCTCCTAGATTTATTCATGGATTGATTTCATTTATCAAGAAGGCAACAAGTAAACCAGTACTTGTATATCCCAACAGTGGGGAGACTTATATCGCTGAGAGCAACCAATGGGTGAAATCAAGTGGGGCAGCAGAGCATGATTTTGTCTCCTACATAGGCAAGTGGCGTGATGCTGGGGCTTCCCTTTTTGGTGGCTGCTGCAGGACTACTCCTAATACTATAAGAGGCATAGCAGAGGCAACATATGGGAAACTTAAAGACAAATGTATATAA
>Glyma.20g148900.5 sequence-type=CDS polypeptide=Glyma.20g148900.5.p locus=Glyma.20g148900 id=Glyma.20g148900.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTAGAAGAAGTGTGGAGATTGCACGTGAGGCACGAGAAATTTATTATGATAGGTGCACCAAAGATTCTTCTGACTTTATGAGAGATGAAAGATATAGGAAACGTCCCATTTTAATTGCAGCTTCTGTGGGAAGCTATGGAGCGTATTTGGCTGATGGCTCTGAATATGTTGGGGACTATGGTGATGCAGTTACTGTCCAGACACTGAAAGATTTTCACAGGGAAAGAGTAAAGATTCTTGTTGAGGCTGGTGCTGACTTAATAGCCTTTGAAACAATTCCAAATAAGCTGGAGGCACAGGCTTATGCTGAACTTCTCGAGGAAGAAGGCATAGAAACTCCTGCGTGGTTTTCTTTTAGTTGTAAGGATGAAAGCAATGTGGTTAGTGGTGACTCTATCTTTGAATGCGCTTCAATAGCTGATTCATGCAGACAAGTTGTTGCGGTTGGAGTTAATTGTACTGCTCCTAGATTTATTCATGGATTGATTTCATTTATCAAGAAGGCAACAAGTAAACCAGTACTTGTATATCCCAACAGTGGGGAGACTTATATCGCTGAGAGCAACCAATGGGTGAAATCAAGTGGGGCAGCAGAGCATGATTTTGTCTCCTACATAGGCAAGTGGCGTGATGCTGGGGCTTCCCTTTTTGGTGGCTGCTGCAGGACTACTCCTAATACTATAAGAGGCATAGCAGAGGCAACATATGGGAAACTTAAAGACAAATGTATATAA
Predicted protein sequences of Glyma.20g148900
>Glyma.20g148900.2.p sequence-type=predicted peptide transcript=Glyma.20g148900.2 locus=Glyma.20g148900 id=Glyma.20g148900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLEGKETPSFMRDFLDKCGGCAVIDGGFATELERHGADLNDELWSAKCLISSPHLVRRVHLDYLDAGANIILTASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRDERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIAFETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVSGDSIFECASIADSCRQVVAVGVNCTAPRFIHGLISFIKKATSKPVLVYPNSGETYIAESNQWVKSSGAAEHDFVSYIGKWRDAGASLFGGCCRTTPNTIRGIAEATYGKLKDKCI*
>Glyma.20g148900.5.p sequence-type=predicted peptide transcript=Glyma.20g148900.5 locus=Glyma.20g148900 id=Glyma.20g148900.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLRRSVEIAREAREIYYDRCTKDSSDFMRDERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIAFETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVSGDSIFECASIADSCRQVVAVGVNCTAPRFIHGLISFIKKATSKPVLVYPNSGETYIAESNQWVKSSGAAEHDFVSYIGKWRDAGASLFGGCCRTTPNTIRGIAEATYGKLKDKCI*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
