Report for Sequence Feature Glyma.20g148500
| Feature Type: | gene_model |
| Chromosome: | Gm20 |
| Start: | 38673279 |
| stop: | 38675602 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.20g148500
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G67260.2 | AT |
TCP1 |
JGI | N/A | IEA |
| PTHR31072 | PantherFam |
TRANSCRIPTION FACTOR TCP4-RELATED |
JGI | N/A | IEA |
| PF03634 | Pfam |
TCP family transcription factor |
JGI | N/A | IEA |
Proteins Associated with Glyma.20g148500
| Locus | Gene Symbol | Protein Name |
|---|
| | TCP55 | Teosinte branched1 and cycloidea and proliferating cell factor family protein gene 55 |
Gene model name correspondences to Glyma.20g148500 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma20g28670 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.20g148500
>Glyma.20g148500.1 sequence-type=CDS polypeptide=Glyma.20g148500.1.p locus=Glyma.20g148500 id=Glyma.20g148500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCTCTTCCACATATGACTCCTCTAACCTTTTCCCTAACTTCCCTTCGTCTTCTTACCCTATCCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCCACACCCTTCTTGATGACCACCCTCTTGTTGTTCCCGCCGGCCTCATACATGATCCTCCATTACTCCCTGAAGAAACCGTTGCCAATTTTGCAGTTGCAGCTGACTGCACTGCCGCCATGCTTGAACACGATGCAGCAAACACTAACTATGGTTCCCACTATGGTAGCAGCGTTTCCAATTTTCTCACCCAGAAACCTGCTGCAGCCACAGCCAAAAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGGAGGGTGAGATTATCAAGCGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCTTCGATTGGCTCTTCACAAAGTCTGAGAATGCAATCAAAGAACTAGCCCGAAGTAAGCATAGCGGCAGTGTTAGTCGGGGTGACATTAAGTATTCCCGCTACCCGTCTGTGGATTCAAACAACAACAACAAATCATTGGTGGATGGTGGTGATGCTTCCCGAGGGAGGAAGTTGAAATGGGCACAGAGGGATGATGTTTGTGTTCAGAACAAAAAAGAGTCAAGGGAAAGGGCAAGGGCAAGGGCAAGAGAAAGGACTTGTTACAAGATGTGTAGCTGTAGTAGAAGGGTGCAGCAGAAGGACTCTGATGAAAGGTTCCCTGCAACTACAAACACTCAAATGCTACACCAATTGAGGTCTTCCATTCAGCCTGAACTTGAAGATCAACCTCGTGCAAGATGGGTTCAGCCTTATTATAATAACCCTTATTTCATTGATAATGAAGCACCAAGAAATGGCTTTAACGTCATCGAAGAATCTATTATGATAAAAAGGAACATGAAGCCTTCATCTCACCAAAACCTTGTGATCCCTAGGGATGCAAGTTTCAACAACAATGAGTTCCCCCTATTACCCTATTCCAGTACTACTCCAAACTGGGATAGTACTAATGGGGCCGTTAACTTTGGTGGAATAAGCACGATGAATCTATCTACATGTTTCATGAACCCGTGGTAA
>Glyma.20g148500.2 sequence-type=CDS polypeptide=Glyma.20g148500.2.p locus=Glyma.20g148500 id=Glyma.20g148500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCCTCTTCCACATATGACTCCTCTAACCTTTTCCCTAACTTCCCTTCGTCTTCTTACCCTATCCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCCACACCCTTCTTGATGACCACCCTCTTGTTGTTCCCGCCGGCCTCATACATGATCCTCCATTACTCCCTGAAGAAACCGTTGCCAATTTTGCAGTTGCAGCTGACTGCACTGCCGCCATGCTTGAACACGATGCAGCAAACACTAACTATGGTTCCCACTATGGTAGCAGCGTTTCCAATTTTCTCACCCAGAAACCTGCTGCAGCCACAGCCAAAAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGGAGGGTGAGATTATCAAGCGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCTTCGATTGGCTCTTCACAAAGTCTGAGAATGCAATCAAAGAACTAGCCCGAAGTAAGCATAGCGGCAGTGTTAGTCGGGGTGACATTAAGTATTCCCGCTACCCGTCTGTGGATTCAAACAACAACAACAAATCATTGGTGGATGGTGGTGATGCTTCCCGAGGGAGGAAGTTGAAATGGGCACAGAGGGATGATGTTTGTGTTCAGAACAAAAAAGAGTCAAGGGAAAGGGCAAGGGCAAGGGCAAGAGAAAGGACTTGTTACAAGATGTGTAGCTGTAGTAGAAGGGTGCAGCAGAAGGACTCTGATGAAAGGTTCCCTGCAACTACAAACACTCAAATGCTACACCAATTGAGGTCTTCCATTCAGCCTGAACTTGAAGATCAACCTCGTGCAAGATGGGTTCAGCCTTATTATAATAACCCTTATTTCATTGATAATGAAGCACCAAGAAATGGCTTTAACGTCATCGAAGAATCTATTATGATAAAAAGGAACATGAAGCCTTCATCTCACCAAAACCTTGTGATCCCTAGGGATGCAAGTTTCAACAACAATGAGTTCCCCCTATTACCCTATTCCAGTACTACTCCAAACTGGGATAGTACTAATGGGGCCGTTAACTTTGGTGGAATAAGCACGATGAATCTATCTACATGTTTCATGAACCCGTGA
Predicted protein sequences of Glyma.20g148500
>Glyma.20g148500.1.p sequence-type=predicted peptide transcript=Glyma.20g148500.1 locus=Glyma.20g148500 id=Glyma.20g148500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSSTYDSSNLFPNFPSSSYPILPFLIDPENDFASHTLLDDHPLVVPAGLIHDPPLLPEETVANFAVAADCTAAMLEHDAANTNYGSHYGSSVSNFLTQKPAAATAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTFDWLFTKSENAIKELARSKHSGSVSRGDIKYSRYPSVDSNNNNKSLVDGGDASRGRKLKWAQRDDVCVQNKKESRERARARARERTCYKMCSCSRRVQQKDSDERFPATTNTQMLHQLRSSIQPELEDQPRARWVQPYYNNPYFIDNEAPRNGFNVIEESIMIKRNMKPSSHQNLVIPRDASFNNNEFPLLPYSSTTPNWDSTNGAVNFGGISTMNLSTCFMNPW*
>Glyma.20g148500.2.p sequence-type=predicted peptide transcript=Glyma.20g148500.2 locus=Glyma.20g148500 id=Glyma.20g148500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSSTYDSSNLFPNFPSSSYPILPFLIDPENDFASHTLLDDHPLVVPAGLIHDPPLLPEETVANFAVAADCTAAMLEHDAANTNYGSHYGSSVSNFLTQKPAAATAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTFDWLFTKSENAIKELARSKHSGSVSRGDIKYSRYPSVDSNNNNKSLVDGGDASRGRKLKWAQRDDVCVQNKKESRERARARARERTCYKMCSCSRRVQQKDSDERFPATTNTQMLHQLRSSIQPELEDQPRARWVQPYYNNPYFIDNEAPRNGFNVIEESIMIKRNMKPSSHQNLVIPRDASFNNNEFPLLPYSSTTPNWDSTNGAVNFGGISTMNLSTCFMNP*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
