SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g140800

Feature Type:gene_model
Chromosome:Gm20
Start:37941449
stop:37951472
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g140800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G54520.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG0265 KOG U5 snRNP-specific protein-like factor and related proteins JGI N/AIEA
KOG0266 KOG WD40 repeat-containing protein JGI N/AIEA
PTHR22847PantherFam WD40 REPEAT PROTEIN JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.20g140800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g27821 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g140800
>Glyma.20g140800.1 sequence-type=CDS polypeptide=Glyma.20g140800.1.p locus=Glyma.20g140800 id=Glyma.20g140800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCTTCTGTGCAACGCTTATTCGAATGCCTCAGACGACGAAGAAGAAGAACAACCAAAACGACAGAGAGTATCCCTCTCTTCCCCTAACCCGCCAAAACGACACCTTCCTTTGTCTTCTCCTCCTTCATTCAACAACCAAACACAAGCTCCCATGCTCGGAAGATACATTTCCAAACGACAGCGCGCATTGATGGGCTCCACCCCTGCCCCTCTTCCTGAACCGGTTCCTGTTCCGTCTCCGTTCACGCTATCTGGGAGTATCTTGGATGCTGATATACACCATAATATTTTATCATTGTTGAAAAGTAAAGCAAAGGGTCATCAAAGCCCAAACCTGATATCTGAAAAGCTATCTGCAACTCTATACGGGCATACAAAAGCTGTCAATGCTATACATTGGTCATCAAGTCATGCTCACCTCCTTGCATCTGCTGGGATGGATCATGCGGTTTGCATATGGAATGTATGGAGCAGAAATCAGAAGAAAGCATGTGTGCTAAACTTCCACAATGCAGCAGTCAAAGATGTGAAATGGTCTCAGCAAGGGCACTTCCTACTTTCTTGTGGGTATGATTGCACGTCTAGGTTAATTGATGTTGAAAAGGGATTGGAGACTCAGGTTTTCAGAGAAGATCAAATTGTTGGAGTTATAAAGTTCCATCCAGACAATTCAAATCTCTTCCTTTCTGGAGGGTCAAAGGGCCAGGTCAAACTTTGGGATGCCAGAACTGGCAAAATAGTGCACAATTATAATCGAAATTTAGGTCCAATTCTGGATGTTGAGTTCACAATGAATGGGAAGCAATTCATTTCTTCTAGTGATGTATCTCAAAGTAATGCCAGCGAGAATGCTATTATTGTTTGGGATGTGTCAAGAGAGATACCATTGTCTAATCAGGTTTATGTGGAAGCTTATACGTGTCCCTGTGTGAGGCGCCACCCATTTGATTCAACTTTTGTTGCCCAATCAAATGGGAATTATGTTGCAATCTTTACTACCAACCCACCTTACAGACTCAACAAATGTAAGCGATATGAGGGACATGTGGTCTCTGGGTTCCCAGTCAAGTGCAATTTCAGCTTGGATGGGAAAAAACTCGCTTCTGGCTCTTCAGATGGTTCTATCTACCTTTATGATTATCAGTCATCCAAAGTTGTGAAGAAAATCAAGGCCCATGACCAGGCATGCATAGATGTTGCCTTCCACCCTGTTATACCTAATGTTATTGCTTCATGCTCATGGGATGGAAGTATTTTGGTATTTGAGTAG
Predicted protein sequences of Glyma.20g140800
>Glyma.20g140800.1.p sequence-type=predicted peptide transcript=Glyma.20g140800.1 locus=Glyma.20g140800 id=Glyma.20g140800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDLLCNAYSNASDDEEEEQPKRQRVSLSSPNPPKRHLPLSSPPSFNNQTQAPMLGRYISKRQRALMGSTPAPLPEPVPVPSPFTLSGSILDADIHHNILSLLKSKAKGHQSPNLISEKLSATLYGHTKAVNAIHWSSSHAHLLASAGMDHAVCIWNVWSRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGLETQVFREDQIVGVIKFHPDNSNLFLSGGSKGQVKLWDARTGKIVHNYNRNLGPILDVEFTMNGKQFISSSDVSQSNASENAIIVWDVSREIPLSNQVYVEAYTCPCVRRHPFDSTFVAQSNGNYVAIFTTNPPYRLNKCKRYEGHVVSGFPVKCNFSLDGKKLASGSSDGSIYLYDYQSSKVVKKIKAHDQACIDVAFHPVIPNVIASCSWDGSILVFE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo