SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g135900

Feature Type:gene_model
Chromosome:Gm20
Start:37542871
stop:37553294
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g135900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G23780.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K10293KEGG Ubiquitin system JGI N/AIEA
PTHR22844PantherFam F-BOX AND WD40 DOMAIN PROTEIN JGI N/AIEA
PF00646Pfam F-box domain JGI N/AIEA

Gene model name correspondences to Glyma.20g135900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g27261 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g135900
>Glyma.20g135900.1 sequence-type=CDS polypeptide=Glyma.20g135900.1.p locus=Glyma.20g135900 id=Glyma.20g135900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGCTGAGACTCAGATCTTTGGAATCCAAAGAAACCCTTAAAATCGAAGTCCCTGATTCCTGTTCTCTGCTGCAACTCAAAGACACCGTTTCTCGCACCATCTCTTCTTCTTCCTCTTCTCTGCATCTTTCCCTCAACAGAAAGGACGAAATTCATGCCCCTTCGCCGGAAGAGCCCCTCCACTCTCTCGGCGTCGCCGCCGGCGACCTCATCTTCTACTCTCTCAACCCCATCGCCTTCACCCTCGAAACCCTCCTCCACAAGCCAGAAACTGCTTCACGCGACGGTCCCTCCATCCAGGACTCGCCGGAAACCCTCGCCAGCGACTCCCCCTCCGTTCCCGACGCCGAAAAGCCTCCAACTTTGGACGCCGCGGAACTGGAACCCATGGAAATGATTGATGGGTCTGACGAGATGGTGGTGGTGGGTACCAATTCCGAGCCTTTCTTCGTGAGAAGGGTTCTGAAAGAAGCGCTTGGGAACAACGTTAATGATTTCAAGTTATTAGTGTTTGCGGTTCATGGTGTGGTTCTTGAGTCTGGATTTGTTCGAATCGACAAGGATTGTGGTATGGCGGTTACTGGTTCTCACCTTCTTGATGATTCTCCTCCGGCTTTTTCTTCGGTGATATCTTTGAGGTATGCCCTGCCTGAGATTCTGGCTAATGGTGCTTCTCACAGTGTGAATTTGAAATTTCAGACATTGGGGCATTTTGTGAATGTTTGTGGGTCGTTGTCTGATGATGTTGGGTCGAGGTTGCATTTTGTTTGTTTGGATAAACGTAAATATGTTAGGCCTTTAGAATTGATGCTGGCTAATTCTGAAGCTAAGGGTAGTGTTAATGATGGAGAAGATATTCTCTTTGGAAGTGAAGTTTTTGAAATGTGGAAGATGGTGAAAGATAGGCTTGCATTGCCATTGTTAATTGATCTTTGCGAGAAGGCTGGGTTTGATCTTCCACCTTGTTTCACGCGGCTACCGATGGAGCTTAAGCTTTTGATTTTAGAGCGTCTTCCCGGTGTTGATTTGGCCAAAGTGGCTTGCACCTGTTCGGAGTTGCGATACTTGTCCACCAGCAATGAGTTGTGGAAGAAGAAATATGAGGAAGAGTTTGGAAAAGAAGGAGATAGAAAAGGGTGGCTTTTCAAGGATTTGTTTGCTGTGTCCTGGGAAACGAAGAAGAGGTGGCGAGCGGTTCCTTTTCGACGACGGGGGATTTCAAGGAACATTATTTTCTCACCCAACCATTTTAGAATGCCTCCAGTTTGGGGTGGAGAATATGGTGTGCAGCCAGTCTTTGGTGTGCCATTCCCTAGATACCAACTATGGCGGAATATCATTCCCTCGCGTACTCTGACTCTAGGAGATTTCAATATATAA
Predicted protein sequences of Glyma.20g135900
>Glyma.20g135900.1.p sequence-type=predicted peptide transcript=Glyma.20g135900.1 locus=Glyma.20g135900 id=Glyma.20g135900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKLRLRSLESKETLKIEVPDSCSLLQLKDTVSRTISSSSSSLHLSLNRKDEIHAPSPEEPLHSLGVAAGDLIFYSLNPIAFTLETLLHKPETASRDGPSIQDSPETLASDSPSVPDAEKPPTLDAAELEPMEMIDGSDEMVVVGTNSEPFFVRRVLKEALGNNVNDFKLLVFAVHGVVLESGFVRIDKDCGMAVTGSHLLDDSPPAFSSVISLRYALPEILANGASHSVNLKFQTLGHFVNVCGSLSDDVGSRLHFVCLDKRKYVRPLELMLANSEAKGSVNDGEDILFGSEVFEMWKMVKDRLALPLLIDLCEKAGFDLPPCFTRLPMELKLLILERLPGVDLAKVACTCSELRYLSTSNELWKKKYEEEFGKEGDRKGWLFKDLFAVSWETKKRWRAVPFRRRGISRNIIFSPNHFRMPPVWGGEYGVQPVFGVPFPRYQLWRNIIPSRTLTLGDFNI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo