SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g131200

Feature Type:gene_model
Chromosome:Gm20
Start:37167445
stop:37175105
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g131200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G34280.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG0268 KOG Sof1-like rRNA processing protein (contains WD40 repeats) JGI N/AIEA
PTHR22850PantherFam WD40 REPEAT FAMILY JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.20g131200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g26740 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g131200
>Glyma.20g131200.2 sequence-type=CDS polypeptide=Glyma.20g131200.2.p locus=Glyma.20g131200 id=Glyma.20g131200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTCATCGACATCGAATCCTTGGAAGACAGGTATATTGATTTTTGCAGGAGACATGATGTTTTGCCTAATTCTTCTATTTTGTCAAGCCTTTTCAAGGCTGAGGTCAAAAAGTCCAACCATGAGCCGTGTAGCATGGAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTGACTTGTGCATGAACTTAGATACTTCTGAAATAGAGGCTGTTGATGTACGTAATGAATCATCATCTGTATTAAATGGAGAATATGCATTATCATTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTCCATCTACAGGATTCATCATTTGGAAAAGACTTCTTACGGGATATTTCACAACGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGTTCACGTTTCCGGAAGCTGAACTTAATGGGGGAGTTCATGCATATACACACCCTAAATCTTGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAAGACTGTTTTAATTGTATGCCCAACCTAATGCGCCTCTCAATGTGTGATACACAGATTACAAATCTTTGGACGACTGTTGCAGCTCTCTCTAAGCTTCCATCTTTGATTGAATTAAGGTTTCAATATTTGCAGTATTGCAATGATGCTGTGACATCTTTTATCCCATCCAGTGGGAAGTCTGATGACACTGCTGATTTTAGCCCGCTTGATAGTGTTCCTTTTATTGGTGAACCACACACTGATACAACAGAACTGACAGATCCTAACTTTAATGCTGAAGATCCTCTAAGAAATTTTTATTCCTTTGATGAAGAAGTTATAAATCCTGATGTTCAAAGCATGGTTGAGGATTCTTCAGATGATAGTGAAGTTGGCTTTACTAGTCGTCATCATAAATACTGGTTTGCAGATGTTTTTCCTGGGTGGAGTTCAGAAGTGCCTCTTCAGAATGAGAATGAAGATGGAGAAGAGTCATTGCAAGGTGCTTTTACAGACCGTATTGCTGATGTTTCTATGAAGTATATGTCTTGTCATGCATCACCAATATGCTATGAGAAGCATTACAGAGAGTTCATGATAGCTTCATTGCCGAATCTAAAAAATTTAGATAATATGCCAATCAGAAAGATTGACAAGGAAAGGGCTACCAGAATATTTTCTCAATACTTTGAATATCTTCCATATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTACAGAAGAGAGAAATAAAATCAGGCCACAATAAGGTGCAATCTTCTAAGCATAGGCCATCATATCCTTCTGGAAAGTCCCAATATTTTTATACTAGGTCTCTTTCTGCTGCTAAATTGGGGTCTTCAACTTGGCCTATTTTGCATCCCCTTTCTTTAGTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGGCAGTTTGAGTACCATCCATCTGACTCTAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATCAACCATGAGACTGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCACATACCAAGAAAAGTTACTGGCATACATGGGAATTTTGGTTGTGTTACCTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAAAAATGTTGCTTTATACGACATCAACAGCGGGAAGCGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCTAATCATTCCCAGTCAATTTTTGCCACTTCATCATTTGATCACGATGTCAAGATGTGGGACTTGAGACAAAAACCAATACACCCTTGCTTCACTGTTTCAAGCTCCAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCATCGGCGGTTGATAATGAGGTTAGACAATATCAGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATCATAAGTGGGAGTTGCGATGAACATATCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTTGAGGGAAGAAACTTAGGAAATTCCATTTTTATTCAATCTTTGAGGGGGGATCCTTTCCGAATAAACTTACTAGCATCTAGTAGCCATGCCAACAAGGATGATTCTGATGATTTGCGACCTTGCCGGTTCCACAGTATGGGAGGTTGA

>Glyma.20g131200.3 sequence-type=CDS polypeptide=Glyma.20g131200.3.p locus=Glyma.20g131200 id=Glyma.20g131200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTGACTTGTGCATGAACTTAGATACTTCTGAAATAGAGGCTGTTGATGTACGTAATGAATCATCATCTGTATTAAATGGAGAATATGCATTATCATTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTCCATCTACAGGATTCATCATTTGGAAAAGACTTCTTACGGGATATTTCACAACGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGTTCACGTTTCCGGAAGCTGAACTTAATGGGGGAGTTCATGCATATACACACCCTAAATCTTGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAAGACTGTTTTAATTGTATGCCCAACCTAATGCGCCTCTCAATGTGTGATACACAGATTACAAATCTTTGGACGACTGTTGCAGCTCTCTCTAAGCTTCCATCTTTGATTGAATTAAGGTTTCAATATTTGCAGTATTGCAATGATGCTGTGACATCTTTTATCCCATCCAGTGGGAAGTCTGATGACACTGCTGATTTTAGCCCGCTTGATAGTGTTCCTTTTATTGGTGAACCACACACTGATACAACAGAACTGACAGATCCTAACTTTAATGCTGAAGATCCTCTAAGAAATTTTTATTCCTTTGATGAAGAAGTTATAAATCCTGATGTTCAAAGCATGGTTGAGGATTCTTCAGATGATAGTGAAGTTGGCTTTACTAGTCGTCATCATAAATACTGGTTTGCAGATGTTTTTCCTGGGTGGAGTTCAGAAGTGCCTCTTCAGAATGAGAATGAAGATGGAGAAGAGTCATTGCAAGGTGCTTTTACAGACCGTATTGCTGATGTTTCTATGAAGTATATGTCTTGTCATGCATCACCAATATGCTATGAGAAGCATTACAGAGAGTTCATGATAGCTTCATTGCCGAATCTAAAAAATTTAGATAATATGCCAATCAGAAAGATTGACAAGGAAAGGGCTACCAGAATATTTTCTCAATACTTTGAATATCTTCCATATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTACAGAAGAGAGAAATAAAATCAGGCCACAATAAGGTGCAATCTTCTAAGCATAGGCCATCATATCCTTCTGGAAAGTCCCAATATTTTTATACTAGGTCTCTTTCTGCTGCTAAATTGGGGTCTTCAACTTGGCCTATTTTGCATCCCCTTTCTTTAGTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGGCAGTTTGAGTACCATCCATCTGACTCTAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATCAACCATGAGACTGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCACATACCAAGAAAAGTTACTGGCATACATGGGAATTTTGGTTGTGTTACCTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAAAAATGTTGCTTTATACGACATCAACAGCGGGAAGCGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCTAATCATTCCCAGTCAATTTTTGCCACTTCATCATTTGATCACGATGTCAAGATGTGGGACTTGAGACAAAAACCAATACACCCTTGCTTCACTGTTTCAAGCTCCAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCATCGGCGGTTGATAATGAGGTTAGACAATATCAGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATCATAAGTGGGAGTTGCGATGAACATATCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTTGAGGGAAGAAACTTAGGAAATTCCATTTTTATTCAATCTTTGAGGGGGGATCCTTTCCGAGATTTCAATATGAGCGTGTTAGCAGCTTACATGCAGCCAGGCTCCAAGTCTAAAATTGTCAAGATAAACTTACTAGCATCTAGTAGCCATGCCAACAAGGATGATTCTGATGATTTGCGACCTTGCCGGTTCCACAGTATGGGAGGTTGA
Predicted protein sequences of Glyma.20g131200
>Glyma.20g131200.2.p sequence-type=predicted peptide transcript=Glyma.20g131200.2 locus=Glyma.20g131200 id=Glyma.20g131200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVIDIESLEDRYIDFCRRHDVLPNSSILSSLFKAEVKKSNHEPCSMEILIDDLKDVDIAPLLDLCMNLDTSEIEAVDVRNESSSVLNGEYALSLMRAINQKLRVVHLQDSSFGKDFLRDISQRGLACQVLTLRCSRFRKLNLMGEFMHIHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMCDTQITNLWTTVAALSKLPSLIELRFQYLQYCNDAVTSFIPSSGKSDDTADFSPLDSVPFIGEPHTDTTELTDPNFNAEDPLRNFYSFDEEVINPDVQSMVEDSSDDSEVGFTSRHHKYWFADVFPGWSSEVPLQNENEDGEESLQGAFTDRIADVSMKYMSCHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATRIFSQYFEYLPYKWKHKESVVSILQKREIKSGHNKVQSSKHRPSYPSGKSQYFYTRSLSAAKLGSSTWPILHPLSLVGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHETEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSKNVALYDINSGKRLQVFTDMHRGHINVVKFANHSQSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYQAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHIRICCAQTGRRLRDISLEGRNLGNSIFIQSLRGDPFRINLLASSSHANKDDSDDLRPCRFHSMGG*

>Glyma.20g131200.3.p sequence-type=predicted peptide transcript=Glyma.20g131200.3 locus=Glyma.20g131200 id=Glyma.20g131200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEILIDDLKDVDIAPLLDLCMNLDTSEIEAVDVRNESSSVLNGEYALSLMRAINQKLRVVHLQDSSFGKDFLRDISQRGLACQVLTLRCSRFRKLNLMGEFMHIHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMCDTQITNLWTTVAALSKLPSLIELRFQYLQYCNDAVTSFIPSSGKSDDTADFSPLDSVPFIGEPHTDTTELTDPNFNAEDPLRNFYSFDEEVINPDVQSMVEDSSDDSEVGFTSRHHKYWFADVFPGWSSEVPLQNENEDGEESLQGAFTDRIADVSMKYMSCHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATRIFSQYFEYLPYKWKHKESVVSILQKREIKSGHNKVQSSKHRPSYPSGKSQYFYTRSLSAAKLGSSTWPILHPLSLVGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHETEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSKNVALYDINSGKRLQVFTDMHRGHINVVKFANHSQSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYQAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHIRICCAQTGRRLRDISLEGRNLGNSIFIQSLRGDPFRDFNMSVLAAYMQPGSKSKIVKINLLASSSHANKDDSDDLRPCRFHSMGG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo