SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g116200

Feature Type:gene_model
Chromosome:Gm20
Start:35791056
stop:35793868
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g116200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G68480.1AT JAG JGI N/AIEA
PTHR26374PantherFam ZINC FINGER PROTEIN ZAT5 JGI N/AIEA

Proteins Associated with Glyma.20g116200
LocusGene SymbolProtein Name
Ln JAG1 JAGGED gene 1
Ln Ln Narrow leaflets
LN zinc finger protein JAGGED

Gene model name correspondences to Glyma.20g116200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g25000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g116200
>Glyma.20g116200.1 sequence-type=CDS polypeptide=Glyma.20g116200.1.p locus=Glyma.20g116200 id=Glyma.20g116200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGACCAGAACGAAACCCCTTAGATCTTAACAATTTGCCCGATGAGTACTCTAGAGATGGCAAACAAGTCCTCGAAGACCATACCTCTTCATCCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACGGAGACGCTGAACCAGGCTCGTCAACTGGTCTTTCGTTGTGATCATAACATTGCTGCACAAGGTGCCCCTCACTTAGGATGCTGCCAAACAATAGGAACGGGGGGTTATCATCCCTCAGGAGACCCAACAGTGCCTCTAAGATTCCCAAGATACTTCTCAGGTTCATCCTCAACTCACATGCCACCATCCCCGCCACCGCCGCCGCCACCGCAACGACCATACCTATACCCTTCACCTACGAGGCCAGTGTCATTTGGGTCATCACACTTCCCTCTCCAGCATGCAGTGAACGATTACTATGTGGGCCACGTGATGAGTGGTGGCAGCCACGGACACTATGTTGGAGGAGAGAGCACAAGGAGTTACACGTGCATTGGTGCACCGGTGGGGCAAGGTGGCGGATTCGCTGGTGGTAAGGAGGGGTCTGCAGTGCAGGAGGAAGGGTTGAGTACTTGGGGAAGGGGCTATTCAGGTGCACAGGATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA

>Glyma.20g116200.3 sequence-type=CDS polypeptide=Glyma.20g116200.3.p locus=Glyma.20g116200 id=Glyma.20g116200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGACCAGAACGAAACCCCTTAGATCTTAACAATTTGCCCGATGAGTACTCTAGAGATGGCAAACAAGTCCTCGAAGACCATACCTCTTCATCCGTTGCAGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACGGAGACGCTGAACCAGGCTCGTCAACTGGTCTTTCGTTGTGATCATAACATTGCTGCACAAGGTGCCCCTCACTTAGGATGCTGCCAAACAATAGGAACGGGGGGTTATCATCCCTCAGGAGACCCAACAGTGCCTCTAAGATTCCCAAGATACTTCTCAGGTTCATCCTCAACTCACATGCCACCATCCCCGCCACCGCCGCCGCCACCGCAACGACCATACCTATACCCTTCACCTACGAGGCCAGTGTCATTTGGGTCATCACACTTCCCTCTCCAGCATGCAGTGAACGATTACTATGTGGGCCACGTGATGAGTGGTGGCAGCCACGGACACTATGTTGGAGGAGAGAGCACAAGGAGTTACACGTGCATTGGTGCACCGGTGGGGCAAGGTGGCGGATTCGCTGGTGGTAAGGAGGGGTCTGCAGTGCAGGAGGAAGGGTTGAGTACTTGGGGAAGGGGCTATTCAGGTGCACAGGATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA
Predicted protein sequences of Glyma.20g116200
>Glyma.20g116200.1.p sequence-type=predicted peptide transcript=Glyma.20g116200.1 locus=Glyma.20g116200 id=Glyma.20g116200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRPERNPLDLNNLPDEYSRDGKQVLEDHTSSSGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRCDHNIAAQGAPHLGCCQTIGTGGYHPSGDPTVPLRFPRYFSGSSSTHMPPSPPPPPPPQRPYLYPSPTRPVSFGSSHFPLQHAVNDYYVGHVMSGGSHGHYVGGESTRSYTCIGAPVGQGGGFAGGKEGSAVQEEGLSTWGRGYSGAQDRLDPPSAINRFQDGF*

>Glyma.20g116200.3.p sequence-type=predicted peptide transcript=Glyma.20g116200.3 locus=Glyma.20g116200 id=Glyma.20g116200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRPERNPLDLNNLPDEYSRDGKQVLEDHTSSSVAGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRCDHNIAAQGAPHLGCCQTIGTGGYHPSGDPTVPLRFPRYFSGSSSTHMPPSPPPPPPPQRPYLYPSPTRPVSFGSSHFPLQHAVNDYYVGHVMSGGSHGHYVGGESTRSYTCIGAPVGQGGGFAGGKEGSAVQEEGLSTWGRGYSGAQDRLDPPSAINRFQDGF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo