Glyma.20g111000

Report for Sequence Feature Glyma.20g111000

Feature Type:	gene_model
Chromosome:	Gm20
Start:	35279716
stop:	35283185
Source:	JGI
Version:	Wm82.a4.v1
High confidence:	yes

Annotations for Glyma.20g111000

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G12120.1	AT	FAD2	JGI	N/A	IEA
1.3.1.35	EC		JGI	N/A	IEA
GO:0006629	GO-bp	lipid metabolic process	JGI	N/A	IEA
GO:0055114	GO-bp	obsolete oxidation-reduction process	JGI	N/A	IEA
GO:0016717	GO-mf	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	JGI	N/A	IEA
K10256	KEGG	Lipid biosynthesis proteins	JGI	N/A	IEA
PTHR32100	PantherFam	OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC	JGI	N/A	IEA
PF00487	Pfam	Fatty acid desaturase	JGI	N/A	IEA
PF11960	Pfam	Domain of unknown function (DUF3474)	JGI	N/A	IEA

Proteins Associated with Glyma.20g111000

Locus	Gene Symbol	Protein Name
	FAD2	omega-6 fatty acid desaturase
	FAD2-1B	omega-6 fatty acid desaturase
	FAD2-1B	fatty acid desaturase

Gene model name correspondences to Glyma.20g111000 Gene Call Version Wm82.a4.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma20g24530	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.20g111000

Limit To All Plant Sequences

>Glyma.20g111000.2 sequence-type=CDS polypeptide=Glyma.20g111000.2.p locus=Glyma.20g111000 id=Glyma.20g111000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCTAGCAAAGGAAACAATAATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

>Glyma.20g111000.3 sequence-type=CDS polypeptide=Glyma.20g111000.3.p locus=Glyma.20g111000 id=Glyma.20g111000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

>Glyma.20g111000.4 sequence-type=CDS polypeptide=Glyma.20g111000.4.p locus=Glyma.20g111000 id=Glyma.20g111000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCTAGCAAAGGAAACAATAATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

>Glyma.20g111000.5 sequence-type=CDS polypeptide=Glyma.20g111000.5.p locus=Glyma.20g111000 id=Glyma.20g111000.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCTAGCAAAGGAAACAATAATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

Predicted protein sequences of Glyma.20g111000

Limit To All Plant Sequences

>Glyma.20g111000.2.p sequence-type=predicted peptide transcript=Glyma.20g111000.2 locus=Glyma.20g111000 id=Glyma.20g111000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLAKETIMGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

>Glyma.20g111000.3.p sequence-type=predicted peptide transcript=Glyma.20g111000.3 locus=Glyma.20g111000 id=Glyma.20g111000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

>Glyma.20g111000.4.p sequence-type=predicted peptide transcript=Glyma.20g111000.4 locus=Glyma.20g111000 id=Glyma.20g111000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLAKETIMGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

>Glyma.20g111000.5.p sequence-type=predicted peptide transcript=Glyma.20g111000.5 locus=Glyma.20g111000 id=Glyma.20g111000.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLAKETIMGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

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