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Report for Sequence Feature Glyma.20g109600

Feature Type:gene_model
Chromosome:Gm20
Start:35164990
stop:35169806
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g109600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G14290.1AT PAE2 JGI N/AIEA
3.4.25.1EC proteasome endopeptidase complex JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0051603GO-bp proteolysis involved in cellular protein catabolic process JGI N/AIEA
GO:0005839GO-cc proteasome core complex JGI N/AIEA
GO:0019773GO-cc proteasome core complex, alpha-subunit complex JGI N/AIEA
GO:0004175GO-mf endopeptidase activity JGI N/AIEA
GO:0004298GO-mf threonine-type endopeptidase activity JGI N/AIEA
K02729KEGG Proteasome JGI N/AIEA
KOG0176 KOG 20S proteasome, regulatory subunit alpha type PSMA5/PUP2 JGI N/AIEA
PTHR11599PantherFam PROTEASOME SUBUNIT ALPHA/BETA JGI N/AIEA
PTHR11599:SF14PantherFam PROTEASOME SUBUNIT ALPHA TYPE-5 JGI N/AIEA
PF00227Pfam Proteasome subunit JGI N/AIEA
PF10584Pfam Proteasome subunit A N-terminal signature JGI N/AIEA

Gene model name correspondences to Glyma.20g109600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g24380 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g109600
>Glyma.20g109600.1 sequence-type=CDS polypeptide=Glyma.20g109600.1.p locus=Glyma.20g109600 id=Glyma.20g109600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTCTCACAAGGACTGAGTATGACCGAGGAGTCAACACCTTTTCTCCTGAAGGCCGTTTATTTCAGGTTGAATATGCAATCGAAGCCATCAAGCTGGGATCAACTGCAATTGGGTTGAAGACGAAAGAGGGTGTTGTCCTTGCAGTTGAAAAGCGCATCACTTCGCCGCTTCTGGAGCCAAGTAGTGTTGAGAAAATTATGGAAATTGATGAGCATATAGGTTGTGCAATGAGTGGATTGATTGCTGATGCTCGAACACTTGTTGAGCATGCACGGGTTGAAACTCAGAATCATAGGTTCTCATATGGTGAACCAATGACTGTTGAGTCCACAACCCAAGCTCTTTGTGATCTAGCCTTGCGTTTTGGTGAAGGTGATGAAGAATCCATGTCTCGACCATTTGGAGTATCTCTTCTCATTGCTGGTCATGATGAGAATGGACCTAGCTTATATTACACTGATCCATCTGGCACATTTTGGCAATGCAATGGAAAAGCTATTGGTTCAGGGTCAGAAGGTGCCGACAGTTCTCTGCAAGAACAATACAATAAGGACCTAACTCTTCAAGAAGCTGAGACTATTGCTTTATCCATTTTGAAGCAAGTTATGGAAGAGAAGGTCACTCCCAACAACGTGGACATTGCCAAAGTGGCTCCAACATATCATCTTTATACCCCATCTGAGGTGGAAGCTGTGATAAGTCGTCTATGA

>Glyma.20g109600.2 sequence-type=CDS polypeptide=Glyma.20g109600.2.p locus=Glyma.20g109600 id=Glyma.20g109600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTCTCACAAGGACTGAGTATGACCGAGGAGTCAACACCTTTTCTCCTGAAGGCCGTTTATTTCAGGTTGAATATGCAATCGAAGCCATCAAGCTGGGATCAACTGCAATTGGGTTGAAGACGAAAGAGGGTGTTGTCCTTGCAGTTGAAAAGCGCATCACTTCGCCGCTTCTGGAGCCAAGTAGTGTTGAGAAAATTATGGAAATTGATGAGCATATAGGTTGTGCAATGAGTGGATTGATTGCTGATGCTCGAACACTTGTTGAGCATGCACGGGTTGAAACTCAGAATCATAGGTTCTCATATGGTGAACCAATGACTGTTGAGTCCACAACCCAAGCTCTTTGTGATCTAGCCTTGCGTTTTGGTGAAGGTGATGAAGAATCCATGTCTCGACCATTTGGAGTATCTCTTCTCATTGCTGGTCATGATGAGAATGGACCTAGCTTATATTACACTGATCCATCTGGCACATTTTGGCAATGCAATGGAAAAGCTATTGGTTCAGGGTCAGAAGGTGCCGACAGTTCTCTGCAAGAACAATACAATAAGGACCTAACTCTTCAAGAAGCTGAGACTATTGCTTTATCCATTTTGAAGCAAGTTATGGAAGAGAAGGTCACTCCCAACAACGTGGACATTGCCAAAGTGGCTCCAACATATCATCTTTATACCCCATCTGAGGTGGAAGCTGTGATAAGTCGTCTATGA
Predicted protein sequences of Glyma.20g109600
>Glyma.20g109600.1.p sequence-type=predicted peptide transcript=Glyma.20g109600.1 locus=Glyma.20g109600 id=Glyma.20g109600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL*

>Glyma.20g109600.2.p sequence-type=predicted peptide transcript=Glyma.20g109600.2 locus=Glyma.20g109600 id=Glyma.20g109600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL*






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