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Report for Sequence Feature Glyma.20g081800

Feature Type:gene_model
Chromosome:Gm20
Start:30765495
stop:30769635
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g081800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G43960.1AT JGI N/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
KOG0116 KOG RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains JGI N/AIEA
PTHR10693PantherFam RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN JGI N/AIEA
PTHR10693:SF29PantherFam GB|AAD20086.1 JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF02136Pfam Nuclear transport factor 2 (NTF2) domain JGI N/AIEA

Gene model name correspondences to Glyma.20g081800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g20920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g081800
>Glyma.20g081800.1 sequence-type=CDS polypeptide=Glyma.20g081800.1.p locus=Glyma.20g081800 id=Glyma.20g081800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACGCCCTTTCCCATTCCCGTCACCGCAGCTCAGGTTGGAACGTACTTCGTAGGACAGTACTATCAGGTGCTTCAGAGCCAACCCGAGTTCGTGCACCAGTTTTACTCCGATGCTAGCACCATGCTCCGTATCGACGGCAACGCCAGAGAAACTGCAGCGGCAATGCTTCAAATCCATGCACTGATTATGTCACTCAGTTACGCTAGAATTGAAATCAAGACTGCACAGTCTCTAGAATCTTGGAGTGGTGGTGTTCTTGTGATGGTTTCTGGATCTGTGCAAGTTAAGGACTACAGCCGGAGGAGGAAATTTATGCAGACATTCTTCCTTGCTCCCCAAGAGAAAGGCTTTTTTGTGCTCAATGATATTTTTCACTTTGTTGAAGAGGATCCAGTTCACCAACAACAACCAGTCTTGTTACCTCAGAGCAATCTTGATTCAAAATTGAATGCTTCAAGTGCAACCAATAAACCTGTGTCCAACTACCTGCTGGGTGGAGATATCCAAGCTAGGGACTACGTTGCTACAAATGAGGTCAAAGAAAATGGTGTAGTTGATAATTATGGATTTTCAGAGCAAAGAATGCAGCGGGCCCCTGATACTGAGCATATTAGGGAGGATAATACTGTTGAAGAGTCAAATGGTTCACTTCAATCTTCAGTGAATGCAGTGCAAGACCATGTACCTGTTTCTCCTGATGAACCTGCTGGGGAGCCACAAAAGCACACTTATGCTTCCATTTTACGGGTTGCTAAAGGACTATCTACGCCAGTAGCGTCTCAGCCTTCTCATAAGAATGTGTCCCCTTCAGAATGGGATCATGCTCCACATAGTAGTAGTCAGCAACAGCAAACGATTGCTTCTGCAAATGCATTTGAAAGGTCTGAAACGGATGCAGTGGAGGAGTTTCCTGCAACAGAAGATGAAGGTTACTATGAAATCAAGTCTGTTTATGTGAGAAACTTGTCACCTGCAGTGTCTCCTTCTGAAATTGAAGACGAATTCAAGAATTTTGGTAGAATCAGGCCTGATGGTGTTGTTGTTAGAAGTCGCAAGGATGTCGGTGTTTGTTATGCATTTGTTGAATTTGAAGATATGACTGGCGTTCATAATGCAGTCAAGGCAGGATCTGTTCAAATAGCAGGAAGACAAGTATACATTGAAGAACGAAGACCAAACAGTAACATCCCTTCTCGAGGAGGAAGACGGGGTAGAGGCAGAGGTAGCTATCAGTCAGATGCACCAAGAGGGCGTTTCAATTCAAGGAACTTTGGCAGGGGAAATGGCCAAGATGGCGGTGATAGGGATTATAACAAATCGAAAGGAAATGGTTTCTATCGACCAAGTCCCCACCAAGAGAGGGGACATTCAGGGCATCATCAAGTACCGAGAAATGGGCAGAATCTTGCTGAGTCCTGA

>Glyma.20g081800.2 sequence-type=CDS polypeptide=Glyma.20g081800.2.p locus=Glyma.20g081800 id=Glyma.20g081800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACGCCCTTTCCCATTCCCGTCACCGCAGCTCAGGTTGGAACGTACTTCGTAGGACAGTACTATCAGGTGCTTCAGAGCCAACCCGAGTTCGTGCACCAGTTTTACTCCGATGCTAGCACCATGCTCCGTATCGACGGCAACGCCAGAGAAACTGCAGCGGCAATGCTTCAAATCCATGCACTGATTATGTCACTCAGTTACGCTAGAATTGAAATCAAGACTGCACAGTCTCTAGAATCTTGGAGTGGTGGTGTTCTTGTGATGGTTTCTGGATCTGTGCAAGTTAAGGACTACAGCCGGAGGAGGAAATTTATGCAGACATTCTTCCTTGCTCCCCAAGAGAAAGGCTTTTTTGTGCTCAATGATATTTTTCACTTTGTTGAAGAGGATCCAGTTCACCAACAACAACCAGTCTTGTTACCTCAGAGCAATCTTGATTCAAAATTGAATGCTTCAAGTGCAACCAATAAACCTGTGTCCAACTACCTGCTGGGTGGAGATATCCAAGCTAGGGACTACGTTGCTACAAATGAGGTCAAAGAAAATGGTGTAGTTGATAATTATGGATTTTCAGAGCAAAGAATGCAGCGGGCCCCTGATACTGAGCATATTAGGGAGGATAATACTGTTGAAGAGTCAAATGGTTCACTTCAATCTTCAGTGAATGCAGTGCAAGACCATGTACCTGTTTCTCCTGATGAACCTGCTGGGGAGCCACAAAAGCACACTTATGCTTCCATTTTACGGGTTGCTAAAGGACTATCTACGCCAGTAGCGTCTCAGCCTTCTCATAAGAATGTGTCCCCTTCAGAATGGGATCATGCTCCACATAGTAGTAGTCAGCAACAGCAAACGATTGCTTCTGCAAATGCATTTGAAAGGTCTGAAACGGATGCAGTGGAGGAGTTTCCTGCAACAGAAGATGAAGATGAAATCAAGTCTGTTTATGTGAGAAACTTGTCACCTGCAGTGTCTCCTTCTGAAATTGAAGACGAATTCAAGAATTTTGGTAGAATCAGGCCTGATGGTGTTGTTGTTAGAAGTCGCAAGGATGTCGGTGTTTGTTATGCATTTGTTGAATTTGAAGATATGACTGGCGTTCATAATGCAGTCAAGGCAGGATCTGTTCAAATAGCAGGAAGACAAGTATACATTGAAGAACGAAGACCAAACAGTAACATCCCTTCTCGAGGAGGAAGACGGGGTAGAGGCAGAGGTAGCTATCAGTCAGATGCACCAAGAGGGCGTTTCAATTCAAGGAACTTTGGCAGGGGAAATGGCCAAGATGGCGGTGATAGGGATTATAACAAATCGAAAGGAAATGGTTTCTATCGACCAAGTCCCCACCAAGAGAGGGGACATTCAGGGCATCATCAAGTACCGAGAAATGGGCAGAATCTTGCTGAGTCCTGA
Predicted protein sequences of Glyma.20g081800
>Glyma.20g081800.1.p sequence-type=predicted peptide transcript=Glyma.20g081800.1 locus=Glyma.20g081800 id=Glyma.20g081800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATPFPIPVTAAQVGTYFVGQYYQVLQSQPEFVHQFYSDASTMLRIDGNARETAAAMLQIHALIMSLSYARIEIKTAQSLESWSGGVLVMVSGSVQVKDYSRRRKFMQTFFLAPQEKGFFVLNDIFHFVEEDPVHQQQPVLLPQSNLDSKLNASSATNKPVSNYLLGGDIQARDYVATNEVKENGVVDNYGFSEQRMQRAPDTEHIREDNTVEESNGSLQSSVNAVQDHVPVSPDEPAGEPQKHTYASILRVAKGLSTPVASQPSHKNVSPSEWDHAPHSSSQQQQTIASANAFERSETDAVEEFPATEDEGYYEIKSVYVRNLSPAVSPSEIEDEFKNFGRIRPDGVVVRSRKDVGVCYAFVEFEDMTGVHNAVKAGSVQIAGRQVYIEERRPNSNIPSRGGRRGRGRGSYQSDAPRGRFNSRNFGRGNGQDGGDRDYNKSKGNGFYRPSPHQERGHSGHHQVPRNGQNLAES*

>Glyma.20g081800.2.p sequence-type=predicted peptide transcript=Glyma.20g081800.2 locus=Glyma.20g081800 id=Glyma.20g081800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATPFPIPVTAAQVGTYFVGQYYQVLQSQPEFVHQFYSDASTMLRIDGNARETAAAMLQIHALIMSLSYARIEIKTAQSLESWSGGVLVMVSGSVQVKDYSRRRKFMQTFFLAPQEKGFFVLNDIFHFVEEDPVHQQQPVLLPQSNLDSKLNASSATNKPVSNYLLGGDIQARDYVATNEVKENGVVDNYGFSEQRMQRAPDTEHIREDNTVEESNGSLQSSVNAVQDHVPVSPDEPAGEPQKHTYASILRVAKGLSTPVASQPSHKNVSPSEWDHAPHSSSQQQQTIASANAFERSETDAVEEFPATEDEDEIKSVYVRNLSPAVSPSEIEDEFKNFGRIRPDGVVVRSRKDVGVCYAFVEFEDMTGVHNAVKAGSVQIAGRQVYIEERRPNSNIPSRGGRRGRGRGSYQSDAPRGRFNSRNFGRGNGQDGGDRDYNKSKGNGFYRPSPHQERGHSGHHQVPRNGQNLAES*






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