SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g079100

Feature Type:gene_model
Chromosome:Gm20
Start:29349444
stop:29363043
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g079100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G24010.1AT ATING1,ING1 JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
K11346KEGG Chromosome and associated proteins JGI N/AIEA
KOG1973 KOG Chromatin remodeling protein, contains PHD Zn-finger JGI N/AIEA
PTHR10333PantherFam INHIBITOR OF GROWTH PROTEIN JGI N/AIEA
PF12998Pfam Inhibitor of growth proteins N-terminal histone-binding JGI N/AIEA

Gene model name correspondences to Glyma.20g079100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g19970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g079100
>Glyma.20g079100.1 sequence-type=CDS polypeptide=Glyma.20g079100.1.p locus=Glyma.20g079100 id=Glyma.20g079100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGTTTCTTGAAGAATTTCATGCCAATTTGGATTCACTACCCGTTATTCTTCGGAAGAAGTATACACTGTTGCGTGACCTAGATAAGAGCTTACAGGATATTAAAAGGCAAAATGAACAGCGTTGTGAACAAGAAATTGAAGATATTAAGCGAGGTGTTAGGTCTGGAAACATCACGCCTGATACTTCGGCAATTAGATTCTCTGATGAAGCGCTTGATGAGCAAAAGCATAGCATCAGGGTTGCTGATGAAAAAGTAGCCTTGGCTGTCCAGGCTTATGATTTGGTAGATACAAACATACAACAACTTGATCAGTATCTGAAAAAGTTTGATGAGGAGATTCGGCGTGAAAGAGAAAACGCTGCAATAACTGGAGTACCTGCTTCAGGTCCTGAAGGTAATACAAAATCTGGAAGGGGTAATGAAAGTGGTACTGGTAGAGGAGGGCGAAAAAAAACACGGCAAACAACAATGGTCACAGAAGCACAAGCCACTTCAAACCCAACTGGCATGGATTTAGAGTTACCAGTTGATCCAAATGAACCCACATACTGCTTTTGTAATCAAGTTAGCTATGGAGCGATGGTTGCATGCGATAACCCCAATTGTAAAATAGAGTGGTTTCATTTTGGTTGTGTTGGTCTGAAAGAACAACCAAAAGGAAAATGGTACTGTTCGAATTGTGCAGCAACCAAAAATCGGCGTAGAAGCAAATGA
Predicted protein sequences of Glyma.20g079100
>Glyma.20g079100.1.p sequence-type=predicted peptide transcript=Glyma.20g079100.1 locus=Glyma.20g079100 id=Glyma.20g079100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSFLEEFHANLDSLPVILRKKYTLLRDLDKSLQDIKRQNEQRCEQEIEDIKRGVRSGNITPDTSAIRFSDEALDEQKHSIRVADEKVALAVQAYDLVDTNIQQLDQYLKKFDEEIRRERENAAITGVPASGPEGNTKSGRGNESGTGRGGRKKTRQTTMVTEAQATSNPTGMDLELPVDPNEPTYCFCNQVSYGAMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCSNCAATKNRRRSK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo