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Report for Sequence Feature Glyma.20g072900

Feature Type:gene_model
Chromosome:Gm20
Start:25725323
stop:25727501
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20g072900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G03540.3AT exocyst subunit exo70 family protein A1 JGI N/AIEA
GO:0006887GO-bp exocytosis EnsemblGenomesN/AIEA
GO:0006887GO-bp exocytosis JGI N/AIEA
GO:0000145GO-cc exocyst EnsemblGenomesN/AIEA
GO:0000145GO-cc exocyst JGI N/AIEA
PTHR12542Panther EXOCYST COMPLEX PROTEIN EXO70 JGI N/AIEA
PTHR12542:SF7Panther EXOCYST COMPLEX COMPONENT 7 JGI N/AIEA
PF03081PFAM Exo70 exocyst complex subunit JGI N/AIEA

Expression Patterns of Glyma.20g072900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.20g072900 not represented in the dataset
Glyma.20g072900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20g072900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g17545 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g072900
>Glyma.20g072900.1 sequence-type=CDS polypeptide=Glyma.20g072900.1.p locus=Glyma.20g072900 ID=Glyma.20g072900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCACCCCATCCTCCATTGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCATCAAGTGGTGGTGGTGGTGGTAGTACTGCTAGTGGCGATGCAGGGAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGACACAGAGTTGCGTGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGCTGCCTGCCTACAGATCATTTGTGAAACGTTTTGGGCCACTAGTGGAGAATGTAAAGAGTACTCAGAGGTACGTCAAATACACTGCTGAAGATCTAGAGCGAATCTTAGGTGAGTTTTTTGAAGGAAAAAACATGAATGATAATAAGCGGTAA
Predicted protein sequences of Glyma.20g072900
>Glyma.20g072900.1.p sequence-type=predicted peptide transcript=Glyma.20g072900.1 locus=Glyma.20g072900 ID=Glyma.20g072900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSPHPPLILQSLSIQGLISSSGGGGGSTASGDAGSSGASRAIVKDRFKTFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYVKYTAEDLERILGEFFEGKNMNDNKR*






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