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Report for Sequence Feature Glyma.20g067100

Feature Type:gene_model
Chromosome:Gm20
Start:23993469
stop:23993840
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20g067100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G05530.1AT regulatory particle triple-A ATPase 5A JGI N/AIEA
GO:1901800GO-bp positive regulation of proteasomal protein catabolic process EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0036402GO-mf proteasome-activating ATPase activity EnsemblGenomesN/AIEA
PTHR23073Panther 26S PROTEASE REGULATORY SUBUNIT JGI N/AIEA
PTHR23073:SF7Panther 26S PROTEASE REGULATORY SUBUNIT 6A JGI N/AIEA
PF00004PFAM ATPase family associated with various cellular activities (AAA) JGI N/AIEA

Expression Patterns of Glyma.20g067100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.20g067100 not represented in the dataset
Glyma.20g067100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20g067100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g16463 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g067100
>Glyma.20g067100.1 sequence-type=CDS polypeptide=Glyma.20g067100.1.p locus=Glyma.20g067100 ID=Glyma.20g067100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGTTGATGAAAAGCCAATGAAGGACTACAATGACATTGGTGGTTTAGAAAAGCAAATACTCTATAAATTGGTTGAAACTATTGTTTTGCCAATGACCCACAAGGAGCGGTTCCAGAAATTTGGAGTTGGTCCACCGGAGGGAGTGCTCTTATATGGACCTCCAGGAACTGGAAAAACACTAATTGCCCATGCTTGTGTAGCACAAGCAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAGACATGA
Predicted protein sequences of Glyma.20g067100
>Glyma.20g067100.1.p sequence-type=predicted peptide transcript=Glyma.20g067100.1 locus=Glyma.20g067100 ID=Glyma.20g067100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEVDEKPMKDYNDIGGLEKQILYKLVETIVLPMTHKERFQKFGVGPPEGVLLYGPPGTGKTLIAHACVAQANATFLKLAGPQLVQT*






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