Glyma.20g066100

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Report for Sequence Feature Glyma.20g066100

Feature Type:	gene_model
Chromosome:	Gm20
Start:	23415656
stop:	23418864
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.20g066100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G42050.1	AT	DCD (Development and Cell Death) domain protein	JGI	N/A	IEA
PF10539	PFAM	Development and cell death domain	JGI	N/A	IEA

Proteins Associated with Glyma.20g066100

Locus	Gene Symbol	Protein Name
	NRP-A	N-rich protein

Expression Patterns of Glyma.20g066100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.20g066100 not represented in the dataset	Glyma.20g066100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.20g066100

Paralog	Evidence	Comments
Glyma.13g003200	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.20g066100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma20g16100	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.20g066100

Limit To All Plant Sequences

>Glyma.20g066100.2 sequence-type=transcript locus=Glyma.20g066100 ID=Glyma.20g066100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATCTTTATTTAATACTTGTCTTCTCTCTTTTCCAACCATCTCTTGCTGCTTCACTCTTCTTCAATTCATATCATATCAATTAGATTTAGAGCTAAACATAAAATTGTTTTCACATACCATGGACAACAACAATGACTTTTGGAAATTCAGTGACCAGTTGAGGCTTGAATCTGGTTTGGCCAATCTGTCTCTGAATGATTATTCCATTTGGAGCAACAGCTACAGCTCCAAGAGGCCTGATCAGAGGAGGAACTTTGATGTCAAGGGCAGTGATTTCAACAACAACAACAACTCATCAAAGGCTTTTGATGATGATTTCAATGATGGGTGGAAGATCACCAATTCCAATGGACCCCTTTTCTCTATGCCTCacaacaacaacaacaacaCTCTTGAAGTTGGAGGCTTCAACAAGGGAGGAGGAATCTATTCCAACACCAACACCACCATTTCCTCCTACCATCCTAATAACCTTAACAACAACGCTTTTGGAGGCTTCAACAAGGGAATCTATTCCAACACCACATCCTCACCCTATCTTaacaacaaccaccaccacctcgacgacaacaacaacctcaacaGAAATAATCTCAAGGGCTACAAGACATATTTTAAGGGTGAAGATCAGTTTCACACACCCAAAAGTGCcaagaagaagaacaccaccaacaacaccaacaacaagaaGCATGGGGACAACACTAATAATAATGATGGCACAAAGACTGGTGCTGAGAAGAAATTCAAAACACTTCCACCATCAGAGTCTCTGCCTAAGAATGAAACCATTGGAGGCTACATCTTTGTTTGCAACAATGATACCATGGCAGAGAATCTCCAAAGACAGCTCTTTGGTCTGCCTCCACGATACAGAGATTCAGTAAGAACAATAACTCCAGGGTTGCCCATTTTTCTGTACAACTACTCCACTCACCAACTCCATGGTATCTTTGAGGCTGCAAGTTTTGGAGGATCCAATATTGATCCAACGGCTTGGGAGGACAAGAAGTGCCCTGGTGAATCTCGTTTCCCTGCTCAGGTTCAAGTGATTACTAGGAAAGTTTGTGAGCCACTAGAGGAAGATTCCTTTAGACCAATTCTTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGGTATGCATCAACTTGTGGAATATGTTACTGATCCTTATGGTAGATGATGTGGTCAACTAAATTGCGTCCTATTTTTTTTATTATTTCAGGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATTTTCAAAGCCATTCCAGCATAGAAGGGTAGAAATTATACAAGAAGAGAGAAGTTACAAGGACAATGGATAATGAATGAATACTGTGGATTCATATTATTAGAGTGTCAGAAGATAATTAAGACAACGAATATTGAATTTCAGCCGTCATATATTTGTGTTATAATTACTACTATAATGTTATTTGTATAGAGGCTGTTATGCCTGGTTGCCCATTTTTTTCTTGTTATGGGTGTATATGAACATCACATAAAAGAATACAATAAGAAGGAACTAACTTTGTTCATGATTTTTTCTGCAAAATTACAAATTCAACGGAATGGCCTGCATTTTGTAGCTTTTAGTAATTGCTGGGATTGAACTCTAGGTGAAATAAATAGTGAGTGCGAGCCTGTGAGGCCCTGCTTTAAATGTTTTTCATTCAAAGGGGAGATTTGATTTATTGGTTCATTTTGGGGCATTAACATCTCTGCTTTAATCTTTGATATTTGCAAACTATGTTTGAGTTTTCGTTGGAAGATCTATTTATACATCATTAAAGGGTAATACTGATACATATGAGTATGGTTAATTTTAAGGGGACATATGATTTTCTGTAATGCCTCATATCAATTATACCACAATAAAAGGAATTCAGAGATTATACAATTAGAATAATTTTAGAAAAATAATTGATATTATTAATATTCACAACTTGTATCTACTTTTTATAATTTATCACCTAAATTTTTTATAATTAAATGTGTTTGATTTAAAATAATTACAGAAAATTTGACCCTTGGAGGTTACCTATTTCATAACAGTGAAGGTTACCTATTTATAATTGTTCCAAGTGAAGCATGTGGTTCGTCCGGTTCTTACACATTCAACTTGGAGTGTCAATTCAAATGTTGATGGTTTTGTGTATGGCTCAGTAGATAATAGGTAGAGGAGCAAATGAAATTTATTTCAAATGTGGGATAATTAGTTAGGCAAAGCTGCTACATCAGACAATGCCATTTGATAAGCTGGCGTTGCCTTAACACTAACAATTGCATAAACTAAAAGGAAGCATCTGGCTCTAATTTGACCAAAAAATTGGACCACAGTAACTAAACTATATATAAAACTTTCAGCATAAATAAACTAAGGATATTTTTACTCGAGGCTTTGTCTTCACTCTAATTCTTTGGTTATTGGTTATTTTTTACAAAATCGTTGATGAATAATGATTAACACTCACTTTATTACGCTTTATTGGGtagagggaagagaa

>Glyma.20g066100.3 sequence-type=transcript locus=Glyma.20g066100 ID=Glyma.20g066100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATCTTTATTTAATACTTGTCTTCTCTCTTTTCCAACCATCTCTTGCTGCTTCACTCTTCTTCAATTCATATCATATCAATTAGATTTAGAGCTAAACATAAAATTGTTTTCACATACCATGGACAACAACAATGACTTTTGGAAATTCAGTGACCAGTTGAGGCTTGAATCTGGTTTGGCCAATCTGTCTCTGAATGATTATTCCATTTGGAGCAACAGCTACAGCTCCAAGAGGCCTGATCAGAGGAGGAACTTTGATGTCAAGGGCAGTGATTTCAACAACAACAACAACTCATCAAAGGCTTTTGATGATGATTTCAATGATGGGTGGAAGATCACCAATTCCAATGGACCCCTTTTCTCTATGCCTCacaacaacaacaacaacaCTCTTGAAGTTGGAGGCTTCAACAAGGGAGGAGGAATCTATTCCAACACCAACACCACCATTTCCTCCTACCATCCTAATAACCTTAACAACAACGCTTTTGGAGGCTTCAACAAGGGAATCTATTCCAACACCACATCCTCACCCTATCTTaacaacaaccaccaccacctcgacgacaacaacaacctcaacaGAAATAATCTCAAGGGCTACAAGACATATTTTAAGGGTGAAGATCAGTTTCACACACCCAAAAGTGCcaagaagaagaacaccaccaacaacaccaacaacaagaaGCATGGGGACAACACTAATAATAATGATGGCACAAAGACTGGTGCTGAGAAGAAATTCAAAACACTTCCACCATCAGAGTCTCTGCCTAAGAATGAAACCATTGGAGGCTACATCTTTGTTTGCAACAATGATACCATGGCAGAGAATCTCCAAAGACAGCTCTTTGGTCTGCCTCCACGATACAGAGATTCAGTAAGAACAATAACTCCAGGGTTGCCCATTTTTCTGTACAACTACTCCACTCACCAACTCCATGGTATCTTTGAGGCTGCAAGTTTTGGAGGATCCAATATTGATCCAACGGCTTGGGAGGACAAGAAGTGCCCTGGTGAATCTCGTTTCCCTGCTCAGGTATATATCATCTCATCTCCAATCAAATTAATTTTATTATATCTATGCACAAATTATGCTAATATTAATTTTATAAATTTAATTAAAATGTACTGATGCTGTAAAAGTAAAGTTTTATATTGTCCTTCAAAGTAAAGTTTTATATTGTCCTTCAGTCAATTGATATATCACATATCAATTGAATGATTTCTGATTAAATGGCAATATTG

Coding sequences of Glyma.20g066100

Limit To All Plant Sequences

>Glyma.20g066100.1 sequence-type=CDS polypeptide=Glyma.20g066100.1.p locus=Glyma.20g066100 ID=Glyma.20g066100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACAACAACAATGACTTTTGGAAATTCAGTGACCAGTTGAGGCTTGAATCTGGTTTGGCCAATCTGTCTCTGAATGATTATTCCATTTGGAGCAACAGCTACAGCTCCAAGAGGCCTGATCAGAGGAGGAACTTTGATGTCAAGGGCAGTGATTTCAACAACAACAACAACTCATCAAAGGCTTTTGATGATGATTTCAATGATGGGTGGAAGATCACCAATTCCAATGGACCCCTTTTCTCTATGCCTCACAACAACAACAACAACACTCTTGAAGTTGGAGGCTTCAACAAGGGAGGAGGAATCTATTCCAACACCAACACCACCATTTCCTCCTACCATCCTAATAACCTTAACAACAACGCTTTTGGAGGCTTCAACAAGGGAATCTATTCCAACACCACATCCTCACCCTATCTTAACAACAACCACCACCACCTCGACGACAACAACAACCTCAACAGAAATAATCTCAAGGGCTACAAGACATATTTTAAGGGTGAAGATCAGTTTCACACACCCAAAAGTGCCAAGAAGAAGAACACCACCAACAACACCAACAACAAGAAGCATGGGGACAACACTAATAATAATGATGGCACAAAGACTGGTGCTGAGAAGAAATTCAAAACACTTCCACCATCAGAGTCTCTGCCTAAGAATGAAACCATTGGAGGCTACATCTTTGTTTGCAACAATGATACCATGGCAGAGAATCTCCAAAGACAGCTCTTTGGTCTGCCTCCACGATACAGAGATTCAGTAAGAACAATAACTCCAGGGTTGCCCATTTTTCTGTACAACTACTCCACTCACCAACTCCATGGTATCTTTGAGGCTGCAAGTTTTGGAGGATCCAATATTGATCCAACGGCTTGGGAGGACAAGAAGTGCCCTGGTGAATCTCGTTTCCCTGCTCAGGTTCAAGTGATTACTAGGAAAGTTTGTGAGCCACTAGAGGAAGATTCCTTTAGACCAATTCTTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATTTTCAAAGCCATTCCAGCATAG

>Glyma.20g066100.2 sequence-type=CDS polypeptide=Glyma.20g066100.2.p locus=Glyma.20g066100 ID=Glyma.20g066100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACAACAACAATGACTTTTGGAAATTCAGTGACCAGTTGAGGCTTGAATCTGGTTTGGCCAATCTGTCTCTGAATGATTATTCCATTTGGAGCAACAGCTACAGCTCCAAGAGGCCTGATCAGAGGAGGAACTTTGATGTCAAGGGCAGTGATTTCAACAACAACAACAACTCATCAAAGGCTTTTGATGATGATTTCAATGATGGGTGGAAGATCACCAATTCCAATGGACCCCTTTTCTCTATGCCTCACAACAACAACAACAACACTCTTGAAGTTGGAGGCTTCAACAAGGGAGGAGGAATCTATTCCAACACCAACACCACCATTTCCTCCTACCATCCTAATAACCTTAACAACAACGCTTTTGGAGGCTTCAACAAGGGAATCTATTCCAACACCACATCCTCACCCTATCTTAACAACAACCACCACCACCTCGACGACAACAACAACCTCAACAGAAATAATCTCAAGGGCTACAAGACATATTTTAAGGGTGAAGATCAGTTTCACACACCCAAAAGTGCCAAGAAGAAGAACACCACCAACAACACCAACAACAAGAAGCATGGGGACAACACTAATAATAATGATGGCACAAAGACTGGTGCTGAGAAGAAATTCAAAACACTTCCACCATCAGAGTCTCTGCCTAAGAATGAAACCATTGGAGGCTACATCTTTGTTTGCAACAATGATACCATGGCAGAGAATCTCCAAAGACAGCTCTTTGGTCTGCCTCCACGATACAGAGATTCAGTAAGAACAATAACTCCAGGGTTGCCCATTTTTCTGTACAACTACTCCACTCACCAACTCCATGGTATCTTTGAGGCTGCAAGTTTTGGAGGATCCAATATTGATCCAACGGCTTGGGAGGACAAGAAGTGCCCTGGTGAATCTCGTTTCCCTGCTCAGGTTCAAGTGATTACTAGGAAAGTTTGTGAGCCACTAGAGGAAGATTCCTTTAGACCAATTCTTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGGTATGCATCAACTTGTGGAATATGTTACTGATCCTTATGGTAGATGATGTGGTCAACTAA

>Glyma.20g066100.3 sequence-type=CDS polypeptide=Glyma.20g066100.3.p locus=Glyma.20g066100 ID=Glyma.20g066100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACAACAACAATGACTTTTGGAAATTCAGTGACCAGTTGAGGCTTGAATCTGGTTTGGCCAATCTGTCTCTGAATGATTATTCCATTTGGAGCAACAGCTACAGCTCCAAGAGGCCTGATCAGAGGAGGAACTTTGATGTCAAGGGCAGTGATTTCAACAACAACAACAACTCATCAAAGGCTTTTGATGATGATTTCAATGATGGGTGGAAGATCACCAATTCCAATGGACCCCTTTTCTCTATGCCTCACAACAACAACAACAACACTCTTGAAGTTGGAGGCTTCAACAAGGGAGGAGGAATCTATTCCAACACCAACACCACCATTTCCTCCTACCATCCTAATAACCTTAACAACAACGCTTTTGGAGGCTTCAACAAGGGAATCTATTCCAACACCACATCCTCACCCTATCTTAACAACAACCACCACCACCTCGACGACAACAACAACCTCAACAGAAATAATCTCAAGGGCTACAAGACATATTTTAAGGGTGAAGATCAGTTTCACACACCCAAAAGTGCCAAGAAGAAGAACACCACCAACAACACCAACAACAAGAAGCATGGGGACAACACTAATAATAATGATGGCACAAAGACTGGTGCTGAGAAGAAATTCAAAACACTTCCACCATCAGAGTCTCTGCCTAAGAATGAAACCATTGGAGGCTACATCTTTGTTTGCAACAATGATACCATGGCAGAGAATCTCCAAAGACAGCTCTTTGGTCTGCCTCCACGATACAGAGATTCAGTAAGAACAATAACTCCAGGGTTGCCCATTTTTCTGTACAACTACTCCACTCACCAACTCCATGGTATCTTTGAGGCTGCAAGTTTTGGAGGATCCAATATTGATCCAACGGCTTGGGAGGACAAGAAGTGCCCTGGTGAATCTCGTTTCCCTGCTCAGGTATATATCATCTCATCTCCAATCAAATTAATTTTATTATATCTATGCACAAATTATGCTAATATTAATTTTATAAATTTAATTAAAATGTACTGA

Predicted protein sequences of Glyma.20g066100

Limit To All Plant Sequences

>Glyma.20g066100.1.p sequence-type=predicted peptide transcript=Glyma.20g066100.1 locus=Glyma.20g066100 ID=Glyma.20g066100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDNNNDFWKFSDQLRLESGLANLSLNDYSIWSNSYSSKRPDQRRNFDVKGSDFNNNNNSSKAFDDDFNDGWKITNSNGPLFSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPNNLNNNAFGGFNKGIYSNTTSSPYLNNNHHHLDDNNNLNRNNLKGYKTYFKGEDQFHTPKSAKKKNTTNNTNNKKHGDNTNNNDGTKTGAEKKFKTLPPSESLPKNETIGGYIFVCNNDTMAENLQRQLFGLPPRYRDSVRTITPGLPIFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDKKCPGESRFPAQVQVITRKVCEPLEEDSFRPILHHYDGPKFRLELSVPEALSLLDIFANQNSFDDIFKAIPA*

>Glyma.20g066100.2.p sequence-type=predicted peptide transcript=Glyma.20g066100.2 locus=Glyma.20g066100 ID=Glyma.20g066100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDNNNDFWKFSDQLRLESGLANLSLNDYSIWSNSYSSKRPDQRRNFDVKGSDFNNNNNSSKAFDDDFNDGWKITNSNGPLFSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPNNLNNNAFGGFNKGIYSNTTSSPYLNNNHHHLDDNNNLNRNNLKGYKTYFKGEDQFHTPKSAKKKNTTNNTNNKKHGDNTNNNDGTKTGAEKKFKTLPPSESLPKNETIGGYIFVCNNDTMAENLQRQLFGLPPRYRDSVRTITPGLPIFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDKKCPGESRFPAQVQVITRKVCEPLEEDSFRPILHHYDGPKFRLELSVPEVCINLWNMLLILMVDDVVN*

>Glyma.20g066100.3.p sequence-type=predicted peptide transcript=Glyma.20g066100.3 locus=Glyma.20g066100 ID=Glyma.20g066100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDNNNDFWKFSDQLRLESGLANLSLNDYSIWSNSYSSKRPDQRRNFDVKGSDFNNNNNSSKAFDDDFNDGWKITNSNGPLFSMPHNNNNNTLEVGGFNKGGGIYSNTNTTISSYHPNNLNNNAFGGFNKGIYSNTTSSPYLNNNHHHLDDNNNLNRNNLKGYKTYFKGEDQFHTPKSAKKKNTTNNTNNKKHGDNTNNNDGTKTGAEKKFKTLPPSESLPKNETIGGYIFVCNNDTMAENLQRQLFGLPPRYRDSVRTITPGLPIFLYNYSTHQLHGIFEAASFGGSNIDPTAWEDKKCPGESRFPAQVYIISSPIKLILLYLCTNYANINFINLIKMY*

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