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Report for Sequence Feature Glyma.20g064700

Feature Type:gene_model
Chromosome:Gm20
Start:22396877
stop:22410573
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20g064700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G22290.1AT Endoplasmic reticulum vesicle transporter protein JGI N/AIEA
GO:0006096GO-bp glycolytic process EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0004347GO-mf glucose-6-phosphate isomerase activity EnsemblGenomesN/AIEA
KOG2667 KOG COPII vesicle protein JGI N/AIEA
PTHR10984Panther ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN JGI N/AIEA
PTHR10984:SF25Panther ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 3 JGI N/AIEA
PF07970PFAM Endoplasmic reticulum vesicle transporter JGI N/AIEA

Expression Patterns of Glyma.20g064700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20g064700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g15460 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.20g064700
>Glyma.20g064700.2 sequence-type=transcript locus=Glyma.20g064700 ID=Glyma.20g064700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAGAATCCTAAATTCTGTAGGCGTGTTGTGATTATCAGAAGACCAAATCGAGGAATCCGGAAAGGgaagaagaagaagaagaagaGAGTGGAAAAAACAGAAGATGGGAATGAAACAAGTCATTAAAAACCTCGACGCCTTTCCTCGCGCCGAGGATCACTTGTTGCAGAAAACCCAATCTGGGGCTCTCGTATCCGTAATTGGTCTCATTATAATGGCCACATTGTTCGTTCACGAGCTCGGTTATTATCTTACAACTTACACCGTTCACCAGATGTCAGTGGACTTGAAGCGAGGGGAAACTCTTCCAATTCATATTAACATGACGTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTAGATGCCATCGATATGTCGGGCAAGCATGAGGTGGATCTTGATACCAACATATGGAAACTTCGCTTGAACAGTTATGGCCATATAATTGGCACTGAATATATATCTGATCTTGTTGAAAAGGAACATACCCATCACAAGCATGATGATAATAAAAATCATGAGCATTCAGAACAGAAGATTCATTTGCAAAACCTTGATGAATCTACTGAAAATATTATCAAGAAAGTTAAGGAAGCATTAAAAAATGGGGAAGGATGCCGGGTTTATGGTGTTTTAGATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTACATGGACTAAATATATATGTTGCACAAATGATCTTTGATGGAGCAAAGAACGTGAATGTAAGTCATTTCATCCATGATTTATCATTTGGCCCCAAGTATCCAGGACTTCACAACCCACTTGATGACACAACAAGGATTCTGCATGATACCAGTGGAACATTTAAATATTATATAAAGGTTGTTCCAACCGAATATAGATATATCTCAAAAGAAGTTCTACCAACCAATCAGTTCTCAGTATCAGAATATTATTCCCCCATTAATCAGTTTGATCGGACCTGGCCAGCTGTCTACTTTTTGTATGATCTATCACCTATTACTGTCACTATCAAGGAAGAGCGCCGCAGTTTTCTTCATTTTATTACTCGACTTTGTGCTGTGCTAGGTGGAACCTTTGCTGTGACAGGAATGCTTGACCGTTGGATGTACAGACTTCTGGAAACTTTGACTAAATCAAAGTCCAAACGGTAGATCATGAAGTCATTGCAATTTCTAGTAACAACTCTGCGTCTCCAACCAAAGGGGTTTCAGGCACTATGGAATTTACTGCCACCAAAGATTAAAAATATAGTGGTTGCATAGTTGAATCAAGCATTAAATTTTAAGCACGTGTTCATACAGTTCCTTGTAATGTCTGACATCAATGATTAACAGATCTTAATCTCTTTTCTTTTGGAATGAGTGTTTTGGGTTCGGTTTTGACTGTGGACAGCATTGTCTTATGAACCACACCTGTGGAATTTACTTTGTAGAACTCAAATTTTGATTATAGTGACTAAGATAGCTGTCTGTTTCTGTAGTCGTGCAACTCC

>Glyma.20g064700.3 sequence-type=transcript locus=Glyma.20g064700 ID=Glyma.20g064700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GAGAATCCTAAATTCTGTAGGCGTGTTGTGATTATCAGAAGACCAAATCGAGGAATCCGGAAAGGgaagaagaagaagaagaagaGAAAAAAACAGAAGATGGGAATGAAACAAGTCATTAAAAACCTCGACGCCTTTCCTCGCGCCGAGGATCACTTGTTGCAGAAAACCCAATCTGGGGCTCTCGTATCCGTAATTGGTCTCATTATAATGGCCACATTGTTCGTTCACGAGCTCGGTTATTATCTTACAACTTACACCGTTCACCAGATGTCAGTGGACTTGAAGCGAGGGGAAACTCTTCCAATTCATATTAACATGACGTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTAGATGCCATCGATATGTCGGGCAAGCATGAGGTGGATCTTGATACCAACATATGGAAACTTCGCTTGAACAGTTATGGCCATATAATTGGCACTGAATATATATCTGATCTTGTTGAAAAGGAACATACCCATCACAAGCATGATGATAATAAAAATCATGAGCATTCAGAACAGAAGATTCATTTGCAAAACCTTGATGAATCTACTGAAAATATTATCAAGAAAGTTAAGGAAGCATTAAAAAATGGGGAAGGATGCCGGGTTTATGGTGTTTTAGATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTACATGGACTAAATATATATGTTGCACAAATGATCTTTGATGGAGCAAAGAACGTGAATGTAAGTCATTTCATCCATGATTTATCATTTGGCCCCAAGTATCCAGGACTTCACAACCCACTTGATGACACAACAAGGATTCTGCATGATACCAGTGGAACATTTAAATATTATATAAAGGTTGTTCCAACCGAATATAGATATATCTCAAAAGAAGTTCTACCAACCAATCAGTTCTCAGTATCAGAATATTATTCCCCCATTAATCAGTTTGATCGGACCTGGCCAGCTGTCTACTTTTTGTATGATCTATCACCTATTACTGTCACTATCAAGGAAGAGCGCCGCAGTTTTCTTCATTTTATTACTCGACTTTGTGCTGTGCTAGGTGGAACCTTTGCTGTGACAGGAATGCTTGACCGTTGGATGTACAGACTTCTGGAAACTTTGACTAAATCAAAGTCCAAACGGTAGATCATGAAGTCATTGCAATTTCTAGTAACAACTCTGCGTCTCCAACCAAAGGGGTTTCAGGCACTATGGAATTTACTGCCACCAAAGATTAAAAATATAGTGGTTGCATAGTTGAATCAAGCATTAAATTTTAAGCACGTGTTCATACAGTTCCTTGTAATGTCTGACATCAATGATTAACAGATCTTAATCTCTTTTCTTTTGGAATGAGTGTTTTGGGTTCGGTTTTGACTGTGGACAGCATTGTCTTATGAACCACACCTGTGGAATTTACTTTGTAGAACTCAAATTTTGATTATAGTGACTAAGATAGCTGTCTGTTTCTGTAGTCGTGCAACTCC
Coding sequences of Glyma.20g064700
>Glyma.20g064700.1 sequence-type=CDS polypeptide=Glyma.20g064700.1.p locus=Glyma.20g064700 ID=Glyma.20g064700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAATGAAACAAGTCATTAAAAACCTCGACGCCTTTCCTCGCGCCGAGGATCACTTGTTGCAGAAAACCCAATCTGGGGCTCTCGTATCCGTAATTGGTCTCATTATAATGGCCACATTGTTCGTTCACGAGCTCGGTTATTATCTTACAACTTACACCGTTCACCAGATGTCAGTGGACTTGAAGCGAGGGGAAACTCTTCCAATTCATATTAACATGACGTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTAGATGCCATCGATATGTCGGGCAAGCATGAGGTGGATCTTGATACCAACATATGGAAACTTCGCTTGAACAGTTATGGCCATATAATTGGCACTGAATATATATCTGATCTTGTTGAAAAGGAACATACCCATCACAAGCATGATGATAATAAAAATCATGAGCATTCAGAACAGAAGATTCATTTGCAAAACCTTGATGAATCTACTGAAAATATTATCAAGAAAGTTAAGGAAGCATTAAAAAATGGGGAAGGATGCCGGGTTTATGGTGTTTTAGATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTACATGGACTAAATATATATGTTGCACAAATGATCTTTGATGGAGCAAAGAACGTGAATGTAAGTCATTTCATCCATGATTTATCATTTGGCCCCAAGTATCCAGGACTTCACAACCCACTTGATGACACAACAAGGATTCTGCATGATACCAGTGGAACATTTAAATATTATATAAAGGTTGTTCCAACCGAATATAGATATATCTCAAAAGAAGTTCTACCAACCAATCAGTTCTCAGTATCAGAATATTATTCCCCCATTAATCAGTTTGATCGGACCTGGCCAGCTGTCTACTTTTTGTATGATCTATCACCTATTACTGTCACTATCAAGGAAGAGCGCCGCAGTTTTCTTCATTTTATTACTCGACTTTGTGCTGTGCTAGGTGGAACCTTTGCTGTGACAGGAATGCTTGACCGTTGGATGTACAGACTTCTGGAAACTTTGACTAAATCAAAGTCCAAACGGTAG

>Glyma.20g064700.2 sequence-type=CDS polypeptide=Glyma.20g064700.2.p locus=Glyma.20g064700 ID=Glyma.20g064700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAATGAAACAAGTCATTAAAAACCTCGACGCCTTTCCTCGCGCCGAGGATCACTTGTTGCAGAAAACCCAATCTGGGGCTCTCGTATCCGTAATTGGTCTCATTATAATGGCCACATTGTTCGTTCACGAGCTCGGTTATTATCTTACAACTTACACCGTTCACCAGATGTCAGTGGACTTGAAGCGAGGGGAAACTCTTCCAATTCATATTAACATGACGTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTAGATGCCATCGATATGTCGGGCAAGCATGAGGTGGATCTTGATACCAACATATGGAAACTTCGCTTGAACAGTTATGGCCATATAATTGGCACTGAATATATATCTGATCTTGTTGAAAAGGAACATACCCATCACAAGCATGATGATAATAAAAATCATGAGCATTCAGAACAGAAGATTCATTTGCAAAACCTTGATGAATCTACTGAAAATATTATCAAGAAAGTTAAGGAAGCATTAAAAAATGGGGAAGGATGCCGGGTTTATGGTGTTTTAGATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTACATGGACTAAATATATATGTTGCACAAATGATCTTTGATGGAGCAAAGAACGTGAATGTAAGTCATTTCATCCATGATTTATCATTTGGCCCCAAGTATCCAGGACTTCACAACCCACTTGATGACACAACAAGGATTCTGCATGATACCAGTGGAACATTTAAATATTATATAAAGGTTGTTCCAACCGAATATAGATATATCTCAAAAGAAGTTCTACCAACCAATCAGTTCTCAGTATCAGAATATTATTCCCCCATTAATCAGTTTGATCGGACCTGGCCAGCTGTCTACTTTTTGTATGATCTATCACCTATTACTGTCACTATCAAGGAAGAGCGCCGCAGTTTTCTTCATTTTATTACTCGACTTTGTGCTGTGCTAGGTGGAACCTTTGCTGTGACAGGAATGCTTGACCGTTGGATGTACAGACTTCTGGAAACTTTGACTAAATCAAAGTCCAAACGGTAG

>Glyma.20g064700.3 sequence-type=CDS polypeptide=Glyma.20g064700.3.p locus=Glyma.20g064700 ID=Glyma.20g064700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAATGAAACAAGTCATTAAAAACCTCGACGCCTTTCCTCGCGCCGAGGATCACTTGTTGCAGAAAACCCAATCTGGGGCTCTCGTATCCGTAATTGGTCTCATTATAATGGCCACATTGTTCGTTCACGAGCTCGGTTATTATCTTACAACTTACACCGTTCACCAGATGTCAGTGGACTTGAAGCGAGGGGAAACTCTTCCAATTCATATTAACATGACGTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTAGATGCCATCGATATGTCGGGCAAGCATGAGGTGGATCTTGATACCAACATATGGAAACTTCGCTTGAACAGTTATGGCCATATAATTGGCACTGAATATATATCTGATCTTGTTGAAAAGGAACATACCCATCACAAGCATGATGATAATAAAAATCATGAGCATTCAGAACAGAAGATTCATTTGCAAAACCTTGATGAATCTACTGAAAATATTATCAAGAAAGTTAAGGAAGCATTAAAAAATGGGGAAGGATGCCGGGTTTATGGTGTTTTAGATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTACATGGACTAAATATATATGTTGCACAAATGATCTTTGATGGAGCAAAGAACGTGAATGTAAGTCATTTCATCCATGATTTATCATTTGGCCCCAAGTATCCAGGACTTCACAACCCACTTGATGACACAACAAGGATTCTGCATGATACCAGTGGAACATTTAAATATTATATAAAGGTTGTTCCAACCGAATATAGATATATCTCAAAAGAAGTTCTACCAACCAATCAGTTCTCAGTATCAGAATATTATTCCCCCATTAATCAGTTTGATCGGACCTGGCCAGCTGTCTACTTTTTGTATGATCTATCACCTATTACTGTCACTATCAAGGAAGAGCGCCGCAGTTTTCTTCATTTTATTACTCGACTTTGTGCTGTGCTAGGTGGAACCTTTGCTGTGACAGGAATGCTTGACCGTTGGATGTACAGACTTCTGGAAACTTTGACTAAATCAAAGTCCAAACGGTAG
Predicted protein sequences of Glyma.20g064700
>Glyma.20g064700.1.p sequence-type=predicted peptide transcript=Glyma.20g064700.1 locus=Glyma.20g064700 ID=Glyma.20g064700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGMKQVIKNLDAFPRAEDHLLQKTQSGALVSVIGLIIMATLFVHELGYYLTTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYISDLVEKEHTHHKHDDNKNHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSKR*

>Glyma.20g064700.2.p sequence-type=predicted peptide transcript=Glyma.20g064700.2 locus=Glyma.20g064700 ID=Glyma.20g064700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGMKQVIKNLDAFPRAEDHLLQKTQSGALVSVIGLIIMATLFVHELGYYLTTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYISDLVEKEHTHHKHDDNKNHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSKR*

>Glyma.20g064700.3.p sequence-type=predicted peptide transcript=Glyma.20g064700.3 locus=Glyma.20g064700 ID=Glyma.20g064700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGMKQVIKNLDAFPRAEDHLLQKTQSGALVSVIGLIIMATLFVHELGYYLTTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYISDLVEKEHTHHKHDDNKNHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSKR*






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