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Report for Sequence Feature Glyma.20g054000

Feature Type:gene_model
Chromosome:Gm20
Start:12395991
stop:12408264
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g054000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G45140.1AT ATLOX2,LOX2 JGI N/AIEA
1.13.11.12EC linoleate 13S-lipoxygenase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0016702GO-mf oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K00454KEGG alpha-Linolenic acid metabolism JGI N/AIEA
PTHR11771PantherFam LIPOXYGENASE JGI N/AIEA
PF00305Pfam Lipoxygenase JGI N/AIEA
PF01477Pfam PLAT/LH2 domain JGI N/AIEA

Gene model name correspondences to Glyma.20g054000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g11610 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g054000
>Glyma.20g054000.1 sequence-type=CDS polypeptide=Glyma.20g054000.1.p locus=Glyma.20g054000 id=Glyma.20g054000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATAATAAAATATACTCTCACATTTGCCATATGAATATAGGTAGTTGCTTCTTGAGCCAAGGCAAACTCTCTTTCCCAGCAAGTAGTAATATTAGGGTTCCGAGAGAGGTTCGCATAGGGTGCGTGTCTCGGCACGTGAAGGCTGTGATGAGGAAAAAGAGTGGCACCTCCAACAACAACCCTAATAAGGCTCAGAATGCGAAGGCCATTGTGATTGTGAAGCGAAGTGGTGGTGGTGGGCTACTAACGAATCTCGTTAGAGATGGTGTTGAAGGGATTGAAGAGTTGGTTGGGAAAACTCTTATTTTGGAGCTTGTTAGCAATGAGCTTGATTCAAAAACAAACTTAGAGAAAAAGACAATTAAAGGTGATGCACACAAGACTGAGGAAAAAGAGGATGAGGTGTATTATGAGGCCACATTTGAGTTACCAACAGAGTTCGGGAAAGTTGGTGCTGTTTTGGTTGAGAATGAACATCACAATGAGATGTTTTTAAAGAGCATAGTCTTTGATGGTTTCCCTGATGGCCCTGTGCACCTCACCTGTGATTCATGGGTTCAGCCCAAGTATGATAATCCTGTCAAGAGAGTCTTCTTTACAGACAAGTCATACTTGCCATCACAAACACCAAGTGGATTGAGAAGGTTGAGGGAAGAGGAATTGGAACTACTAAGAGGGAATGGAGAAGGAGAACGCAAGAGCTCTGATAGAATATATGATTATGATGTGTACAATGATCTTGGGGATCCTGATTCTAACATTAACCTCAAAAGACCTGTTCTTGGAGGCTCCAAACAATATCCATATCCAAGAAGGTGTCGTACTGGTCGAGAACACACTGATTCAGATCCATCATCTGAGAAGAGAAGTTTAGATTTTTATGTTCCTCGCGATGAGACATTTTCTGATGTAAAACAGTCACAATTCACAATGAGCACAATATCCTCAGGACTGAGTGCAATTTTAGAATCCTTAGATGCAATTCTCACTGACCAAAATCTTGGATTTAGAAGCTTCGAAGACATAGACACGATCTACAAAGAAGGATTTAAGTTACCACCTCTTAAAGGCAATGGCCTAAATTTCCTCCAAAGAACCGTTCCCAGGTTGATCGAGGCTGCTAATGATAGCCAGAACCTTTTGCGCTTTGATACCCCGGAAACACTTAAAAGGGACAAATTTTTTTGGTTTTCAGATGAGGAATTTGCCAGAGAGACTTTGGCAGGGGTGAACCCATATAGCATCCAATTGGTCAAGGAATGGCCTCTAAGAAGTAAACTAGAATCCCAAATCTATGGTCCACCAGAATCAGCTATCACCAGAGAAGTCATCGAGCCACATATACTAGGTTATGGCACAATTGAAGAGGCCATTAAAGAGAAGAAGTTGTACATGTTAGACTATCATGATCTATTGTTACCATATGTAAGCAAAGTGAGAGAGATTGAAGGAACCACACTATATGGATCACGAACACTATTCTTTCTCACTAAACAAGGAACATTGAAGCCACTAGCTATTGAGCTCACTAGGCCACCTATTGATGGCAAGCCACAATGGAAGCAAGTCTTCACTCCTGCTTCTTATTCAATTTCTCATTCAACCAATCTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTTCTTGCCCATGATGCTGGTGTTCATGAACTTATAAATCATTGGTTAAGAACTCATGCTGTCATGGAACCCTTTGTCGTTGCAACAAATAGGCAACTAAGTGTCATGCATCCAATCTACAAACTACTGCATCCACATTTGACATACACTCTGGCTATTAATTCACTTGCTCGTGAAATTCTTATCAATGGAAATGGGATCATTGAAAAATCATTTTCACCAAATAAATATTCAATGGAGTTAAGCTCCGCGGCATATGATCAACTTTGGCGATTTGATTTGCAAGCACTTCCTAATGATCTTATTGACAGAGGAATTGCTGTGGTAGATCCAAATGCACCACATGGCCTAAAGCTAACAATTGAAGACTACCCTTTTGCCAATGATGGTCTTCTCATATGGGATGCCATCAAACAATGGATAACTGAGTATGTCAACCATTACTATCCAACCCCAAGTATCATAGAATCTGACCAAGAGCTTCAACCATGGTGGACAGAAATTAGAACAGTGGGTCATGGAGACAAATCTGAAGAACCATGGTGGCCAAATCTCAAAACACCAAAAGACCTTATTGACATCATCACCACCATAGCTTGGACAGCATCTGCTCATCATGCAGCTGTTAACTTTACCCAATATACTTATGGAGGCTATTTTCCTAATCGACCGAACATTGTTAGAACCAAAATACCTACAGAAGATCCTTCTAAGGAAGAGTGGGAAACTTTTCTAAACAATCCTGAGCAAACTCTTTTGGAGTCTTTCCCATCACAAATCCAAGCAACTACAATGATGTTAGTTTTTAACATACTATCATATCATTCCCCAGATGAAGAGTATATTGGGCAATACTTGAAGCCATCATGGGCTGAGGATCCAACTATAAAGGCATCCTTTGAAAGGTTCAATGGGAGACTCAAGGAAATTGAAGGTATTATAGACTCAAGGAATGCAGATTGTAATATGAAAAATAGACATGGTGTTGGGGTGGTGCCTTATGAGCAGATGAAGCCATTTTCAGGACCTGGAATCACTGGAAAAGGAATTCCATATAGCGTATCCATTTAA

>Glyma.20g054000.2 sequence-type=CDS polypeptide=Glyma.20g054000.2.p locus=Glyma.20g054000 id=Glyma.20g054000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATAATAAAATATACTCTCACATTTGCCATATGAATATAGGTAGTTGCTTCTTGAGCCAAGGCAAACTCTCTTTCCCAGCAAGTAGTAATATTAGGGTTCCGAGAGAGGTTCGCATAGGGTGCGTGTCTCGGCACGTGAAGGCTGTGATGAGGAAAAAGAGTGGCACCTCCAACAACAACCCTAATAAGGCTCAGAATGCGAAGGCCATTGTGATTGTGAAGCGAAGTGGTGGTGGTGGGCTACTAACGAATCTCGTTAGAGATGGTGTTGAAGGGATTGAAGAGTTGGTTGGGAAAACTCTTATTTTGGAGCTTGTTAGCAATGAGCTTGATTCAAAAACAAACTTAGAGAAAAAGACAATTAAAGGTGATGCACACAAGACTGAGGAAAAAGAGGATGAGGTGTATTATGAGGCCACATTTGAGTTACCAACAGAGTTCGGGAAAGTTGGTGCTGTTTTGGTTGAGAATGAACATCACAATGAGATGTTTTTAAAGAGCATAGTCTTTGATGGTTTCCCTGATGGCCCTGTGCACCTCACCTGTGATTCATGGGTTCAGCCCAAGTATGATAATCCTGTCAAGAGAGTCTTCTTTACAGACAAGTCATACTTGCCATCACAAACACCAAGTGGATTGAGAAGGTTGAGGGAAGAGGAATTGGAACTACTAAGAGGGAATGGAGAAGGAGAACGCAAGAGCTCTGATAGAATATATGATTATGATGTGTACAATGATCTTGGGGATCCTGATTCTAACATTAACCTCAAAAGACCTGTTCTTGGAGGCTCCAAACAATATCCATATCCAAGAAGGTGTCGTACTGGTCGAGAACACACTGATTCAGATCCATCATCTGAGAAGAGAAGTTTAGATTTTTATGTTCCTCGCGATGAGACATTTTCTGATGTAAAACAGTCACAATTCACAATGAGCACAATATCCTCAGGACTGAGTGCAATTTTAGAATCCTTAGATGCAATTCTCACTGACCAAAATCTTGGATTTAGAAGCTTCGAAGACATAGACACGATCTACAAAGAAGGATTTAAGTTACCACCTCTTAAAGGCAATGGCCTAAATTTCCTCCAAAGAACCGTTCCCAGGTTGATCGAGGCTGCTAATGATAGCCAGAACCTTTTGCGCTTTGATACCCCGGAAACACTTAAAAATGAGGAATTTGCCAGAGAGACTTTGGCAGGGGTGAACCCATATAGCATCCAATTGGTCAAGGAATGGCCTCTAAGAAGTAAACTAGAATCCCAAATCTATGGTCCACCAGAATCAGCTATCACCAGAGAAGTCATCGAGCCACATATACTAGGTTATGGCACAATTGAAGAGGCCATTAAAGAGAAGAAGTTGTACATGTTAGACTATCATGATCTATTGTTACCATATGTAAGCAAAGTGAGAGAGATTGAAGGAACCACACTATATGGATCACGAACACTATTCTTTCTCACTAAACAAGGAACATTGAAGCCACTAGCTATTGAGCTCACTAGGCCACCTATTGATGGCAAGCCACAATGGAAGCAAGTCTTCACTCCTGCTTCTTATTCAATTTCTCATTCAACCAATCTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTTCTTGCCCATGATGCTGGTGTTCATGAACTTATAAATCATTGGTTAAGAACTCATGCTGTCATGGAACCCTTTGTCGTTGCAACAAATAGGCAACTAAGTGTCATGCATCCAATCTACAAACTACTGCATCCACATTTGACATACACTCTGGCTATTAATTCACTTGCTCGTGAAATTCTTATCAATGGAAATGGGATCATTGAAAAATCATTTTCACCAAATAAATATTCAATGGAGTTAAGCTCCGCGGCATATGATCAACTTTGGCGATTTGATTTGCAAGCACTTCCTAATGATCTTATTGACAGAGGAATTGCTGTGGTAGATCCAAATGCACCACATGGCCTAAAGCTAACAATTGAAGACTACCCTTTTGCCAATGATGGTCTTCTCATATGGGATGCCATCAAACAATGGATAACTGAGTATGTCAACCATTACTATCCAACCCCAAGTATCATAGAATCTGACCAAGAGCTTCAACCATGGTGGACAGAAATTAGAACAGTGGGTCATGGAGACAAATCTGAAGAACCATGGTGGCCAAATCTCAAAACACCAAAAGACCTTATTGACATCATCACCACCATAGCTTGGACAGCATCTGCTCATCATGCAGCTGTTAACTTTACCCAATATACTTATGGAGGCTATTTTCCTAATCGACCGAACATTGTTAGAACCAAAATACCTACAGAAGATCCTTCTAAGGAAGAGTGGGAAACTTTTCTAAACAATCCTGAGCAAACTCTTTTGGAGTCTTTCCCATCACAAATCCAAGCAACTACAATGATGTTAGTTTTTAACATACTATCATATCATTCCCCAGATGAAGAGTATATTGGGCAATACTTGAAGCCATCATGGGCTGAGGATCCAACTATAAAGGCATCCTTTGAAAGGTTCAATGGGAGACTCAAGGAAATTGAAGGTATTATAGACTCAAGGAATGCAGATTGTAATATGAAAAATAGACATGGTGTTGGGGTGGTGCCTTATGAGCAGATGAAGCCATTTTCAGGACCTGGAATCACTGGAAAAGGAATTCCATATAGCGTATCCATTTAA
Predicted protein sequences of Glyma.20g054000
>Glyma.20g054000.1.p sequence-type=predicted peptide transcript=Glyma.20g054000.1 locus=Glyma.20g054000 id=Glyma.20g054000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHNKIYSHICHMNIGSCFLSQGKLSFPASSNIRVPREVRIGCVSRHVKAVMRKKSGTSNNNPNKAQNAKAIVIVKRSGGGGLLTNLVRDGVEGIEELVGKTLILELVSNELDSKTNLEKKTIKGDAHKTEEKEDEVYYEATFELPTEFGKVGAVLVENEHHNEMFLKSIVFDGFPDGPVHLTCDSWVQPKYDNPVKRVFFTDKSYLPSQTPSGLRRLREEELELLRGNGEGERKSSDRIYDYDVYNDLGDPDSNINLKRPVLGGSKQYPYPRRCRTGREHTDSDPSSEKRSLDFYVPRDETFSDVKQSQFTMSTISSGLSAILESLDAILTDQNLGFRSFEDIDTIYKEGFKLPPLKGNGLNFLQRTVPRLIEAANDSQNLLRFDTPETLKRDKFFWFSDEEFARETLAGVNPYSIQLVKEWPLRSKLESQIYGPPESAITREVIEPHILGYGTIEEAIKEKKLYMLDYHDLLLPYVSKVREIEGTTLYGSRTLFFLTKQGTLKPLAIELTRPPIDGKPQWKQVFTPASYSISHSTNLWLWRLAKAHVLAHDAGVHELINHWLRTHAVMEPFVVATNRQLSVMHPIYKLLHPHLTYTLAINSLAREILINGNGIIEKSFSPNKYSMELSSAAYDQLWRFDLQALPNDLIDRGIAVVDPNAPHGLKLTIEDYPFANDGLLIWDAIKQWITEYVNHYYPTPSIIESDQELQPWWTEIRTVGHGDKSEEPWWPNLKTPKDLIDIITTIAWTASAHHAAVNFTQYTYGGYFPNRPNIVRTKIPTEDPSKEEWETFLNNPEQTLLESFPSQIQATTMMLVFNILSYHSPDEEYIGQYLKPSWAEDPTIKASFERFNGRLKEIEGIIDSRNADCNMKNRHGVGVVPYEQMKPFSGPGITGKGIPYSVSI*

>Glyma.20g054000.2.p sequence-type=predicted peptide transcript=Glyma.20g054000.2 locus=Glyma.20g054000 id=Glyma.20g054000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHNKIYSHICHMNIGSCFLSQGKLSFPASSNIRVPREVRIGCVSRHVKAVMRKKSGTSNNNPNKAQNAKAIVIVKRSGGGGLLTNLVRDGVEGIEELVGKTLILELVSNELDSKTNLEKKTIKGDAHKTEEKEDEVYYEATFELPTEFGKVGAVLVENEHHNEMFLKSIVFDGFPDGPVHLTCDSWVQPKYDNPVKRVFFTDKSYLPSQTPSGLRRLREEELELLRGNGEGERKSSDRIYDYDVYNDLGDPDSNINLKRPVLGGSKQYPYPRRCRTGREHTDSDPSSEKRSLDFYVPRDETFSDVKQSQFTMSTISSGLSAILESLDAILTDQNLGFRSFEDIDTIYKEGFKLPPLKGNGLNFLQRTVPRLIEAANDSQNLLRFDTPETLKNEEFARETLAGVNPYSIQLVKEWPLRSKLESQIYGPPESAITREVIEPHILGYGTIEEAIKEKKLYMLDYHDLLLPYVSKVREIEGTTLYGSRTLFFLTKQGTLKPLAIELTRPPIDGKPQWKQVFTPASYSISHSTNLWLWRLAKAHVLAHDAGVHELINHWLRTHAVMEPFVVATNRQLSVMHPIYKLLHPHLTYTLAINSLAREILINGNGIIEKSFSPNKYSMELSSAAYDQLWRFDLQALPNDLIDRGIAVVDPNAPHGLKLTIEDYPFANDGLLIWDAIKQWITEYVNHYYPTPSIIESDQELQPWWTEIRTVGHGDKSEEPWWPNLKTPKDLIDIITTIAWTASAHHAAVNFTQYTYGGYFPNRPNIVRTKIPTEDPSKEEWETFLNNPEQTLLESFPSQIQATTMMLVFNILSYHSPDEEYIGQYLKPSWAEDPTIKASFERFNGRLKEIEGIIDSRNADCNMKNRHGVGVVPYEQMKPFSGPGITGKGIPYSVSI*






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