SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g053200

Feature Type:gene_model
Chromosome:Gm20
Start:12014595
stop:12024188
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g053200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G21060.1AT JGI N/AIEA
1.1.1.3EC homoserine dehydrogenase JGI N/AIEA
GO:0006520GO-bp cellular amino acid metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
KOG0455 KOG Homoserine dehydrogenase JGI N/AIEA
PTHR21499PantherFam ASPARTATE KINASE JGI N/AIEA
PF00742Pfam Homoserine dehydrogenase JGI N/AIEA

Gene model name correspondences to Glyma.20g053200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g11950 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g053200
>Glyma.20g053200.1 sequence-type=CDS polypeptide=Glyma.20g053200.1.p locus=Glyma.20g053200 id=Glyma.20g053200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGAATATTCCTCTGATTCTAATGGGTTGTGGAGGAGTTGGTCGTCAACTTCTCCAACACATTGTCTCGTGTCGTTCTCTTCACTTTACACAGGGGCTGTGCTTGAGAGTTGTAGGAGTCGGTGATAGTAAATCTTTGGTGGTTACGGAGGATTTGCTGCATGAGGGGTTGAATGATGGCTTCTTGTTAGAACTTTGCCGGGTCAAGAGTGTCGGCGAATCTCTATTAAAACTTCTTGATTTTGGGAAATGCCAGGCATTTGTGCATCCGGAGTCACAAGGAAAGATTCTAGAGATTGCATTTCAACTTGGTAAAAAGACAGGTTTGGTATTTGTAGATTGCTCTGCTAGCTCTGACACTGTTGCGGTGCTAAAGCAAGCGATTGATATGGGTTGTTGTGCTGTTATGGCAAATAAGAAGCCTCTTACATCTACAATGGAGGATTTTAAAAAACTTTTCATCTATCCACGTCGTATTCGGCATGAGTCAACTGTAGGCGCTGGTCTTCCTGTGATAGCATCACTGAATCGCATAATCTCTTCTGGTGATCCCGTTCATCAAATTATTGGGAGTTTGAGCGGGACATTGGGTTATGTAATGAGTGAGGTTGAAGATGGAAAGCCATTGAGCCAAGTTGTTAGAGATGCTAAAAGTTTGGGGTATACTGAACCAGATCCACGTGATGACCTTGGTGGAATGGACGTCGCTAGAAAGGCTTTAATACTTGCTCGAATACTTGGCCATCAAATTAATCTGGATAGCATTCAGATTGAGAGCTTGTATCCCAAAGAAATGGGGCCTGGCGTAATGACTGTTGAAGACTTCTTGAACCGTGGACTCTTGTTGCTTGATAAAGATATTCAAGATAGAGTTGAGAAGGCAGCTTCAAATGGAAATGTGTTGCGCTATGTCTGTGTGATCATGGGTTCAAGGTGTGAAGTTGGTATTCAGGAGCTTCCAAAGAATTCTCCCTTGGGAAGACTAAGAGGAAGTGATAATGTGTTGGAAATATATACTCGATGCTATAGTAAACAACCACTGGTTATTCAAGGTGCTGGAGCTGGAAATGACACTACTGCTGCTGGGGTTCTTGCTGATATCGTAGATATTCAAGACTTATTTCCTTGA
Predicted protein sequences of Glyma.20g053200
>Glyma.20g053200.1.p sequence-type=predicted peptide transcript=Glyma.20g053200.1 locus=Glyma.20g053200 id=Glyma.20g053200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKNIPLILMGCGGVGRQLLQHIVSCRSLHFTQGLCLRVVGVGDSKSLVVTEDLLHEGLNDGFLLELCRVKSVGESLLKLLDFGKCQAFVHPESQGKILEIAFQLGKKTGLVFVDCSASSDTVAVLKQAIDMGCCAVMANKKPLTSTMEDFKKLFIYPRRIRHESTVGAGLPVIASLNRIISSGDPVHQIIGSLSGTLGYVMSEVEDGKPLSQVVRDAKSLGYTEPDPRDDLGGMDVARKALILARILGHQINLDSIQIESLYPKEMGPGVMTVEDFLNRGLLLLDKDIQDRVEKAASNGNVLRYVCVIMGSRCEVGIQELPKNSPLGRLRGSDNVLEIYTRCYSKQPLVIQGAGAGNDTTAAGVLADIVDIQDLFP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo