SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.20g035800

Feature Type:gene_model
Chromosome:Gm20
Start:5020633
stop:5023099
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g035800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G28300.1AT LEC2 JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31140PantherFam B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 JGI N/AIEA
PF02362Pfam B3 DNA binding domain JGI N/AIEA

Proteins Associated with Glyma.20g035800
LocusGene SymbolProtein Name
LEC2a B3 domain transcription factor

Gene model name correspondences to Glyma.20g035800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g04761 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g035800
>Glyma.20g035800.1 sequence-type=CDS polypeptide=Glyma.20g035800.1.p locus=Glyma.20g035800 id=Glyma.20g035800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAAACTTTTTTGTGCCATTTTTAAAAAAAAACCCCAACCCATCAATCACCACTACTGGTGGCAATGGCTCATCTTCATCAAACCAAACAAGCCTTGTACAACCAAGCACATATCCTCAAAATTTCCCTTACAATACTAGTGTAAAACTTAACTTTCCAGAACAACCTTATTTCATTCCTTTGTATCCCTTTCCAACAGGACAAGTTAGCTTTTCTAATCAACCCTATGGAATGCCAAATTCGGAACTTCAAGGTTCGAGGGCATGCATGACCAAAGCTACAAGGGAGAGATGGAGACAAGTAAGACAAAGGAGTAAAAATTCTACTCTTGTCGCTCCTAATTCAGTTCTAGAAAGGACAACAAGAGAACAATTTGTTCCTAATGGAGGGTCAAATGTGAGGATCACAGTCAAACAACACAATGCAACCAAGTTTTTTAACACCCCAAACGGGAAGAAGCTAGAAGAAATTTTGACAAAGAAGTTGAATAATAGTGATGTTGGCGTCCTAGGCCGCATTGTGCTCCCAAAGAGAGAGGCTGAGGATAAGCTTCCGACACTGTGGAAGAAGGAAGGAATCAATATTGTACTAAAGGATGTATATTCTGAGATTGAATGGAGCATCAAATACAAGTACTGGACTAATAACAAAAGCAGAATGTATATTCTTGATAATACAGGGGATTTTGTTAACCATTATAAACTTCAAACAGGAGATTTCATAACCCTTTACAAGGACGAGTTGAAAAATCTGTATGTGTCGGCTCGAAAGGATCAAGAAAATCTAGAAGAATCTAAGTCCTCGTCAAACACAGGAATGTCACATGAACCAGATGCATATTTAGCTTACTTGACGAAGGAACTTAGCCATAAGGGGAAAGCAGAAGCTGCCAACAACCTTTTGAACAATGTTGAGGAAGAGGCACCAAATCAAGCAAATCAATTACATCAATTCATGCCGATGAACAATATTGTTGGGGAGGGGGCATCAAACCAAGCAATTCAAGAAGCCGCACCAGCCGCACCCGTCAATGTTAATCAAGAAAACAAAGTTGTTGACGACGATGATGATGATATCTATGGTGGCCTTGACAATATTTTCGAAATTGGAAATACTTATCAAATTTGGTAG
Predicted protein sequences of Glyma.20g035800
>Glyma.20g035800.1.p sequence-type=predicted peptide transcript=Glyma.20g035800.1 locus=Glyma.20g035800 id=Glyma.20g035800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MENFFVPFLKKNPNPSITTTGGNGSSSSNQTSLVQPSTYPQNFPYNTSVKLNFPEQPYFIPLYPFPTGQVSFSNQPYGMPNSELQGSRACMTKATRERWRQVRQRSKNSTLVAPNSVLERTTREQFVPNGGSNVRITVKQHNATKFFNTPNGKKLEEILTKKLNNSDVGVLGRIVLPKREAEDKLPTLWKKEGINIVLKDVYSEIEWSIKYKYWTNNKSRMYILDNTGDFVNHYKLQTGDFITLYKDELKNLYVSARKDQENLEESKSSSNTGMSHEPDAYLAYLTKELSHKGKAEAANNLLNNVEEEAPNQANQLHQFMPMNNIVGEGASNQAIQEAAPAAPVNVNQENKVVDDDDDDIYGGLDNIFEIGNTYQIW*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo