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Report for Sequence Feature Glyma.20g032600

Feature Type:gene_model
Chromosome:Gm20
Start:4204879
stop:4212818
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20g032600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G14040.1AT EXS (ERD1/XPR1/SYG1) family protein JGI N/AIEA
GO:0005802GO-cc trans-Golgi network EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
KOG1162 KOG Predicted small molecule transporter JGI N/AIEA
PTHR10783Panther XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED JGI N/AIEA
PTHR10783:SF4Panther XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1 JGI N/AIEA
PF03105PFAM SPX domain JGI N/AIEA
PF03124PFAM EXS family JGI N/AIEA

Proteins Associated with Glyma.20g032600
LocusGene SymbolProtein Name
PHO1-H11 PHO1 family protein

Expression Patterns of Glyma.20g032600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20g032600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g04160 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g032600
>Glyma.20g032600.1 sequence-type=CDS polypeptide=Glyma.20g032600.1.p locus=Glyma.20g032600 ID=Glyma.20g032600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGTTTGGGAAAGAATACACATCCCAAATGGTGCCAGAATGGCAAGAAGCATACATGGATTACAATTTTCTAAAATCCCTTTTGAAAGAAATCCAACGCTTCAAGCTTAGGAACAAGCCTTCTCTCACCCCAAGTGGCCTAAGAAGAAAGCTAACACTATATAGAGCCTTCAGTGGCCTCACACAAACACACTACACTGTTTCTCACAGTCCCTCTCATCAGGAGCAAGATATTGAGAGCCAACCCATCATAGTGAACCGTGACGGCTCTGAAAATAAGTACGAAACTACGTTCCTTATGACCTCAGAAGAAGGTGGAGAATACGAGTTGGTGTACTTCAAGAGGCTCGATGATGAATTCAACAAAGTGGACAAGTTTTACAAGTCAAAAGTGGAGGAAGTGATGAAGGAAGCTGCAATGCTCAACAAGCAAATGGATGCTTTGATAGCTTTCAGGATCAAGGTTGAGAAGCCAAGTTTGTTGTTATTTGATCATTCTGTGGAGATGACTCGTCTTGCTTCTGATGTTGCTTCTTCATCTGCAGTGTTGGCAGTTTCCACACCCAAAGGGGCCAAATTGAACAGAAATGTTTCCATGGCCATGGAAATGATCGAAGAGAGCAACAGTCATAATGAACAATCAGATAATCAAGAACATGTAAAACCAAAAGTTGAGGCAGAGAAGCCAAAGAATACCAGGGTGACTAGACCAGCCCCTTTGGAAATACTTGATCGAGTGCATTTCAACCACAACTATGAAACTCCACGTTCAACTATAAAAGGTGTTCTCAATTTCCATAGCAATACAGAACTAGTTAATTTCAGCAGAAAAAATCTGAACAAAGTTGAGGAACAACTTAAAAGGACATTCATTGAATTCTACCGCAAGCTTAGGCTTCTAAAAAGCTATAGCTTTCTAAATATCTTGGCTTTTTCAAAGATAATGAAGAAATATGATAAGATCACATCAAGAGATGGAGCAAAAGCTTATATGGAAATGGTGGACAACTCCTACCTTGGAAGCTCTGATGTGGTGACAAAACTTATGGATAGGGTTGAAAAAACATTCACTAAGCACTTTTACAACTCGAATCGTAATAAAGCCATGCGTATCTTAAGACCAAAAACAAAGAGAGAAAGACATAGAGTTACATTTTCAATGGGTTTCTTCGCCGGATGCACAACAGCTCTAGTGTTAGCCCTTATTCTAATCATTCGTACTCGTAACATATTCGACAACTCAGAAACTACCAAGTACATGGAAACCTTGTTCCCACTGCACAGTCTGTATGGATTCATAGTTCTACACTTGTTGATGTATGCTGCAAATGTATACTTCTGGAGGCAATATAGAGTGAATCACTCATTCATATTTGGTTTTAAGAGAGGCACTGGCTTGGGATACAATGAAGTCCTTCTTCTCGGTTTTGGCCTAGCAGTTTTCGCACTCGGCAGTGTGCTTGCAAACCTAGACATGCAGATAGATCCAGAGACAAAAGATTACAAAACATTGACAGAACTTATTCCACTCATTTTGCTTCTTGTTGTGATTGCTATTTTATTGTGCCCCTTAAACATCATATATCGGTCAAGCAGGGTTTTCTTCCTCATATGCTTGTTTCACTGCATATGTGCTCCTCTTTACAAGGTCACATTCCCGGATTTCTTCTTGGCAGATCAATTTACTAGTCAGGTGCAAGCCTTGAGAAGTTTTGAGTTCTACATTTGTTACTACTGCGGGGGGGATTTCAAACAAAGAGAAAACACTTGCAACTCTAACAGTGTATTCATAACTTTTTCATTCATCGTTGCTGTTATTCCCTACTGGTGTCGTTTCCTCCAGTGTCTTAGGCGTCTGTTCGAAGAGAAAGATCCAATGCAAGGATATAACGGATTGAAATATTTCCTCACAATTATTGCTGTTTGCCTAAGGACAGCCTATAGTCTTAACAATTCAATGGTGTGGATGGTGCTGGCAATGATTTTCTCAATATTTGCAGCAGTTGCTTCTACATATTGGGACCTTGTAATTGACTGGGGCCTTTTGCAAGGGCATTCCAAGAATCGTTGGTTGAGAGACAAACTTGCAATCCCTCATAAAAGTGTATATTTTATAGCAATGGTCCTTAATGTCTTGCTGAGATTTGCCTGGTTGCAGACAGTTTTGAATTTTAAGTTTACCTTCTTTCACAAACAAGCCGTGAGTAGCATCGTTGCGTGTCTAGAGATCATTCGTCGTGGCATATGGAACTTCTTGAGAGTGGAGAATGAGCACTTGACTAATGTTGGCAAGTTCCGTGCATTCAAGTCCGTGCCTCTCCCTTTCAATTACGATGAAGATGAAGATAAAGATGATTGA
Predicted protein sequences of Glyma.20g032600
>Glyma.20g032600.1.p sequence-type=predicted peptide transcript=Glyma.20g032600.1 locus=Glyma.20g032600 ID=Glyma.20g032600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKFGKEYTSQMVPEWQEAYMDYNFLKSLLKEIQRFKLRNKPSLTPSGLRRKLTLYRAFSGLTQTHYTVSHSPSHQEQDIESQPIIVNRDGSENKYETTFLMTSEEGGEYELVYFKRLDDEFNKVDKFYKSKVEEVMKEAAMLNKQMDALIAFRIKVEKPSLLLFDHSVEMTRLASDVASSSAVLAVSTPKGAKLNRNVSMAMEMIEESNSHNEQSDNQEHVKPKVEAEKPKNTRVTRPAPLEILDRVHFNHNYETPRSTIKGVLNFHSNTELVNFSRKNLNKVEEQLKRTFIEFYRKLRLLKSYSFLNILAFSKIMKKYDKITSRDGAKAYMEMVDNSYLGSSDVVTKLMDRVEKTFTKHFYNSNRNKAMRILRPKTKRERHRVTFSMGFFAGCTTALVLALILIIRTRNIFDNSETTKYMETLFPLHSLYGFIVLHLLMYAANVYFWRQYRVNHSFIFGFKRGTGLGYNEVLLLGFGLAVFALGSVLANLDMQIDPETKDYKTLTELIPLILLLVVIAILLCPLNIIYRSSRVFFLICLFHCICAPLYKVTFPDFFLADQFTSQVQALRSFEFYICYYCGGDFKQRENTCNSNSVFITFSFIVAVIPYWCRFLQCLRRLFEEKDPMQGYNGLKYFLTIIAVCLRTAYSLNNSMVWMVLAMIFSIFAAVASTYWDLVIDWGLLQGHSKNRWLRDKLAIPHKSVYFIAMVLNVLLRFAWLQTVLNFKFTFFHKQAVSSIVACLEIIRRGIWNFLRVENEHLTNVGKFRAFKSVPLPFNYDEDEDKDD*






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