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Report for Sequence Feature Glyma.20g031100

Feature Type:gene_model
Chromosome:Gm20
Start:3790362
stop:3793599
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20g031100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G59960.1AT NAD(P)-linked oxidoreductase superfamily protein JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
KOG1577 KOG Aldo/keto reductase family proteins JGI N/AIEA
PTHR11732Panther ALDO/KETO REDUCTASE JGI N/AIEA
PTHR11732:SF34Panther ALDO-KETO REDUCTASE JGI N/AIEA
PF00248PFAM Aldo/keto reductase family JGI N/AIEA
PWY1F-FLAVSYNSoyCyc9 flavonoid biosynthesis Plant Metabolic Network ISS
GN7V-48148SoyCyc9-rxn 6'-deoxychalcone synthase Plant Metabolic Network ISS

Proteins Associated with Glyma.20g031100
LocusGene SymbolProtein Name
CHR4 chalcone reductase CHR4

Expression Patterns of Glyma.20g031100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20g031100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g03900 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g031100
>Glyma.20g031100.1 sequence-type=CDS polypeptide=Glyma.20g031100.1.p locus=Glyma.20g031100 ID=Glyma.20g031100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTGCAACAAACGTCCCCAAAGTGCTGTTACAACTACAACCACCCTCCAAATCGAACCCACTCTGCGTGCCGGTGATAGGACTCGGCACCGCCGCGGTCCACAACGACGGTGACACGGTGAAGGCTGCAGTCATAGAGGCTATCAAACTCGGTTACAGACACTTCGACACCGCGGCACAGTACGGATCGGAGCAGGCTCTTGGAGAAGCCATTGCCGAAGCACTTCGTGTTGGTCTCATAGCCTCAAGAGACGAGCTTTTCATCACTTCCAAGTTATGGTGTTGTGATAATCATCCCCATCTTGTTCTTCCTGCTCTACAAAATTCGCTTCGGTCTCTTAAATTAGATTATTTGGACCTATATTTAATTCATTGGCCAATTACTGCAAAGCCTGGAATGTGGGAGATGCCTTATTCTGAAGAGAGCCTTGTTCCATTTGACTTAAAGAGTGTGTGGGCAGCAATGGAAGAATGTCACAAACTTGGCCTTACCAAATCAATTGGAGTTAGCAACTTCTCTTGCAAGAAACTTGAAAATCTTCTCTCTTTTGCTACAATTCCTCCTTCTGTCAATCAAGTGGAGATGAATATTGCCTGGCAGCAAAAGAATCTTAGAGCATACTGCAAGGCAAAGGGTATAATTGTGACTGCCTACTCTCCTTTGGGAGCCAAAGGGAGCAAATGGGATATCAATCAAATTTTGGACAATGAATTGACCAAGCAGATTGCACAGGCTCATGGCAAAACTGCAGCTCAGGTATGTCTTAGATGGTTATTTGAGCAAGGTGTGACTTTCATACCAAAGAGCTACAATAAAGAGAGATTAAAGGAAAATTTAGAGATATTTGATTGGTCACTCACCAAAGATGACCATGAAAAGATTAATCAAGTCAAACAGGAGCGTATGTTCAAGTACGGAACAGCAGCATTCCCGCTTCCTGATCTATTTGATGGGGAAACTTAG
Predicted protein sequences of Glyma.20g031100
>Glyma.20g031100.1.p sequence-type=predicted peptide transcript=Glyma.20g031100.1 locus=Glyma.20g031100 ID=Glyma.20g031100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSATNVPKVLLQLQPPSKSNPLCVPVIGLGTAAVHNDGDTVKAAVIEAIKLGYRHFDTAAQYGSEQALGEAIAEALRVGLIASRDELFITSKLWCCDNHPHLVLPALQNSLRSLKLDYLDLYLIHWPITAKPGMWEMPYSEESLVPFDLKSVWAAMEECHKLGLTKSIGVSNFSCKKLENLLSFATIPPSVNQVEMNIAWQQKNLRAYCKAKGIIVTAYSPLGAKGSKWDINQILDNELTKQIAQAHGKTAAQVCLRWLFEQGVTFIPKSYNKERLKENLEIFDWSLTKDDHEKINQVKQERMFKYGTAAFPLPDLFDGET*






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