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Report for Sequence Feature Glyma.20g025500

Feature Type:gene_model
Chromosome:Gm20
Start:2783884
stop:2788365
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g025500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25150.1AT JGI N/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
KOG0116 KOG RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains JGI N/AIEA
PTHR10693PantherFam RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF02136Pfam Nuclear transport factor 2 (NTF2) domain JGI N/AIEA

Gene model name correspondences to Glyma.20g025500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g03060 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g025500
>Glyma.20g025500.1 sequence-type=CDS polypeptide=Glyma.20g025500.1.p locus=Glyma.20g025500 id=Glyma.20g025500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCGTCCGAAGAATCATCAACCACTCAGATGATTGGCAATGCTTTTGTGCAGCAGTATTACTCCATATTGCATCAAGAGCCAGACCAAGTCCACAGATTTTACCAGGAGTCTAGCATCCTAAGTCGACCTGAAGAAGATGGTACCATGACAATGGTGACTACTACTCTGGAAATTAATAAAAAGATACTCTCTCTGGATTACACAAGCTTTAGGGTGGAAATTCTGAGTGCTGATGCGCAGCCTTCATTCAAGGATGGAGTAATTGTTGTCGTGACTGGCTGCCTAACTGGAAGTGACAATCTGAAAAGGAAGTTTACTCAGTCCTTTTTCCTAGCTCCTCAGGACAAAGGCTACTTTGTTTTGAATGATGTTTTCAGATATGTTGATGAGTATAAGTCAGTTGATATTGAATCTGTGCCAGCAAATGATGCTGCTACCGCTGATGAAAGTGCTCCAACAGATGCTTTTGTCCCAGAGCCTGAGGTCATTCATGTTGCTGAAGATGTTCCTCCTAGTCAAACTGCTGTTGTTGATGCTGACATTAGTGTCAGCAAAGAAGTGAGTCAACCACTGGAGAATGGAAATGTATCAGTTACTGAAAAGGTGGTTCCTGTTAATCATGTTAAAGAATCTAGTCATCAGGAGCATAGTCATTATCATGCTGAGAAAGCTGCTTCTAATAATGCACTGGAAGATACTCCAAAGAAGTCTTTTGCATCCATTGTGAATGCACTGAAAGAAAATGCTGCTCCCTTCCATGTGAGGGTTTCCCCCGTGAAACTTGTTGAACAACCACGTGTTTCTAGCATACCTGCACCAGAAGCACCAGCTCCTAGCATTGAAAGTCCACCAGAAAAGAATAATGAGAATGGAGGCAAGGCTTATGCAATATTTGTTGCAAATTTGCCCATGAATGCAACAGTGGAACAGCTGGAACGTGCTTTCAAGAAATTTGGGCCCATTAAACAGGATGGTATTCAAGTTAGAAGTAATAAGCAACAGCAATCTTGTTTTGGTTTTGTGGAATTTGAATCGGCTACTTCAATGCAAAGTGCACTTGAGGCCTCTCCTCCCGTTACCTTGGATGGCCGTAGACTTTCAATTGAAGAAAGGCGAGCTAATAATGATAGGGGGAGGTATTCATCGGGAAGGGGCGGTTACAGGAATGATAGAAATGATAACTTCAGGGGCCGTGGCAACTTCAGTGGCGGCCGTGGTGGTGGTGGCTATGGAAACAGGAATGATAGTTTTGAGAAGCGAAGTGAGTTCTCTGGCCGGCCTCGCGGAGGCAATAATAACGGTGGGGGCCGTAGCAATGGAGAAGCTGTGCCAAGGAGTTATCAGAATGGAGGAGGAGCAAAAGTGACTCGTCAATCAGTGAAAGTTCAGTAA

>Glyma.20g025500.2 sequence-type=CDS polypeptide=Glyma.20g025500.2.p locus=Glyma.20g025500 id=Glyma.20g025500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCGTCCGAAGAATCATCAACCACTCAGATGATTGGCAATGCTTTTGTGCAGCAGTATTACTCCATATTGCATCAAGAGCCAGACCAAGTCCACAGATTTTACCAGGAGTCTAGCATCCTAAGTCGACCTGAAGAAGATGGTACCATGACAATGGTGACTACTACTCTGGAAATTAATAAAAAGATACTCTCTCTGGATTACACAAGCTTTAGGGTGGAAATTCTGAGTGCTGATGCGCAGCCTTCATTCAAGGATGGAGTAATTGTTGTCGTGACTGGCTGCCTAACTGGAAGTGACAATCTGAAAAGGAAGTTTACTCAGTCCTTTTTCCTAGCTCCTCAGGACAAAGGCTACTTTGTTTTGAATGATGTTTTCAGATATGTTGATGAGTATAAGTCAGTTGATATTGAATCTGTGCCAGCAAATGATGCTGCTACCGCTGATGAAAGTGCTCCAACAGATGCTTTTGTCCCAGAGCCTGAGGTCATTCATGTTGCTGAAGATGTTCCTCCTAGTCAAACTGCTGTTGTTGATGCTGACATTAGTGTCAGCAAAGAAGTGAGTCAACCACTGGAGAATGGAAATGTATCAGTTACTGAAAAGGTGGTTCCTGTTAATCATGTTAAAGAATCTAGTCATCAGGAGCATAGTCATTATCATGCTGAGAAAGCTGCTTCTAATAATGCACTGGAAGATACTCCAAAGAAGTCTTTTGCATCCATTGTGAATGCACTGAAAGAAAATGCTGCTCCCTTCCATGTGAGGGTTTCCCCCGTGAAACTTGTTGAACAACCACGTGTTTCTAGCATACCTGCACCAGAAGCACCAGCTCCTAGCATTGAAAGTCCACCAGAAAAGAATAATGAGAATGGAGGCAAGGCTTATGCAATATTTGTTGCAAATTTGCCCATGAATGCAACAGTGGAACAGCTGGAACGTGCTTTCAAGAAATTTGGGCCCATTAAACAGGATGGTATTCAAGTTAGAAGTAATAAGCAATCTTGTTTTGGTTTTGTGGAATTTGAATCGGCTACTTCAATGCAAAGTGCACTTGAGGCCTCTCCTCCCGTTACCTTGGATGGCCGTAGACTTTCAATTGAAGAAAGGCGAGCTAATAATGATAGGGGGAGGTATTCATCGGGAAGGGGCGGTTACAGGAATGATAGAAATGATAACTTCAGGGGCCGTGGCAACTTCAGTGGCGGCCGTGGTGGTGGTGGCTATGGAAACAGGAATGATAGTTTTGAGAAGCGAAGTGAGTTCTCTGGCCGGCCTCGCGGAGGCAATAATAACGGTGGGGGCCGTAGCAATGGAGAAGCTGTGCCAAGGAGTTATCAGAATGGAGGAGGAGCAAAAGTGACTCGTCAATCAGTGAAAGTTCAGTAA
Predicted protein sequences of Glyma.20g025500
>Glyma.20g025500.1.p sequence-type=predicted peptide transcript=Glyma.20g025500.1 locus=Glyma.20g025500 id=Glyma.20g025500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAASEESSTTQMIGNAFVQQYYSILHQEPDQVHRFYQESSILSRPEEDGTMTMVTTTLEINKKILSLDYTSFRVEILSADAQPSFKDGVIVVVTGCLTGSDNLKRKFTQSFFLAPQDKGYFVLNDVFRYVDEYKSVDIESVPANDAATADESAPTDAFVPEPEVIHVAEDVPPSQTAVVDADISVSKEVSQPLENGNVSVTEKVVPVNHVKESSHQEHSHYHAEKAASNNALEDTPKKSFASIVNALKENAAPFHVRVSPVKLVEQPRVSSIPAPEAPAPSIESPPEKNNENGGKAYAIFVANLPMNATVEQLERAFKKFGPIKQDGIQVRSNKQQQSCFGFVEFESATSMQSALEASPPVTLDGRRLSIEERRANNDRGRYSSGRGGYRNDRNDNFRGRGNFSGGRGGGGYGNRNDSFEKRSEFSGRPRGGNNNGGGRSNGEAVPRSYQNGGGAKVTRQSVKVQ*

>Glyma.20g025500.2.p sequence-type=predicted peptide transcript=Glyma.20g025500.2 locus=Glyma.20g025500 id=Glyma.20g025500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAASEESSTTQMIGNAFVQQYYSILHQEPDQVHRFYQESSILSRPEEDGTMTMVTTTLEINKKILSLDYTSFRVEILSADAQPSFKDGVIVVVTGCLTGSDNLKRKFTQSFFLAPQDKGYFVLNDVFRYVDEYKSVDIESVPANDAATADESAPTDAFVPEPEVIHVAEDVPPSQTAVVDADISVSKEVSQPLENGNVSVTEKVVPVNHVKESSHQEHSHYHAEKAASNNALEDTPKKSFASIVNALKENAAPFHVRVSPVKLVEQPRVSSIPAPEAPAPSIESPPEKNNENGGKAYAIFVANLPMNATVEQLERAFKKFGPIKQDGIQVRSNKQSCFGFVEFESATSMQSALEASPPVTLDGRRLSIEERRANNDRGRYSSGRGGYRNDRNDNFRGRGNFSGGRGGGGYGNRNDSFEKRSEFSGRPRGGNNNGGGRSNGEAVPRSYQNGGGAKVTRQSVKVQ*






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