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Report for Sequence Feature Glyma.20g006800

Feature Type:gene_model
Chromosome:Gm20
Start:656713
stop:659839
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20g006800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G42820.1AT ATU2AF35B,U2AF35B JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K12836KEGG Spliceosome JGI N/AIEA
KOG2202 KOG U2 snRNP splicing factor, small subunit, and related proteins JGI N/AIEA
PTHR12620PantherFam U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT JGI N/AIEA
PF00642Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) JGI N/AIEA
PF13893Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.20g006800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma20g00950 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20g006800
>Glyma.20g006800.1 sequence-type=CDS polypeptide=Glyma.20g006800.1.p locus=Glyma.20g006800 id=Glyma.20g006800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGAGCACCTTGCATCGATCTTCGGCACGGAGAAGGACCGCGTGAACTGCCCGTTCTACTTCAAGATCGGCGCGTGCCGCCATGGCGATCGGTGCTCGCGCCTCCACAACCGCCCCAGCATCTCGCCCACCCTCCTCCTCTCCAACATGTACCAGCGCCCCGACATGATCACCCCCGGCGTCGACCCACAGGGCCAGACCCTCGACCCCCGCAAGATCCAGCAGCACTTCGAGGACTTCTACGAGGACATCTTCACCGAGCTCGCCAAATTCGGCGAAATCGAAAGCCTCAACGTCTGCGACAACCTCGCCGATCACATGATCGGCAACGTCTATGTTCAGTTCCGCGAAGAGGACCAGGCCGCCAAGGCGCTTCACGCGCTTCGTGGGAGATTCTACAACGCACGCCCAATCATCGCTGATTTCTCCCCCGTCACGGATTTTCGCGAGGCCACGTGTCGGCAGTTCGAGGAGAATAGCTGCAACCGCGGCGGGTATTGTAATTTCATGCATGTGAAGCTCATCGGGAGAGATCTACGGAGGCGACTCTTCGGCCGCAACCACCGCGGTGGCAGTGGGACCTACCACCGCGTCAGCCGGAGCAGGAGTCGCAGCCGCAGCGCGAGTCCGAGATACCGCCGGGAGAGACGGGAGAGTGATTCTCGTGGAGGGCGGCGGAGCAGGGAGAGGGACGGCAGCGGTGGACGGAGGAGACAACACGGGAGCCCTCCGGCCAGGGAAGGGAGCGAGGAGCGCCGCGCGAGGATCGAGCAGTGGAATCGGGAGAGGGAGGAGAATAAATGA
Predicted protein sequences of Glyma.20g006800
>Glyma.20g006800.1.p sequence-type=predicted peptide transcript=Glyma.20g006800.1 locus=Glyma.20g006800 id=Glyma.20g006800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDLRRRLFGRNHRGGSGTYHRVSRSRSRSRSASPRYRRERRESDSRGGRRSRERDGSGGRRRQHGSPPAREGSEERRARIEQWNREREENK*






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