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Report for Sequence Feature Glyma.20G111000

Feature Type:gene_model
Chromosome:Gm20
Start:35279716
stop:35283185
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.20G111000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G12120.1AT FAD2 JGI N/AIEA
1.3.1.35EC JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016717GO-mf oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water JGI N/AIEA
K10256KEGG Lipid biosynthesis proteins JGI N/AIEA
PTHR32100PantherFam OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC JGI N/AIEA
PF00487Pfam Fatty acid desaturase JGI N/AIEA
PF11960Pfam Domain of unknown function (DUF3474) JGI N/AIEA

Proteins Associated with Glyma.20G111000
LocusGene SymbolProtein Name
FAD2 omega-6 fatty acid desaturase
FAD2-1B omega-6 fatty acid desaturase
FAD2-1B fatty acid desaturase

Gene model name correspondences to Glyma.20G111000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g111000 Wm82.a4.v1ISS As supplied by JGI
Glyma20g24530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20G111000
>Glyma.20g111000.2 sequence-type=CDS polypeptide=Glyma.20g111000.2.p locus=Glyma.20g111000 id=Glyma.20g111000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCTAGCAAAGGAAACAATAATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

>Glyma.20g111000.3 sequence-type=CDS polypeptide=Glyma.20g111000.3.p locus=Glyma.20g111000 id=Glyma.20g111000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

>Glyma.20g111000.4 sequence-type=CDS polypeptide=Glyma.20g111000.4.p locus=Glyma.20g111000 id=Glyma.20g111000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCTAGCAAAGGAAACAATAATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA

>Glyma.20g111000.5 sequence-type=CDS polypeptide=Glyma.20g111000.5.p locus=Glyma.20g111000 id=Glyma.20g111000.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTCTAGCAAAGGAAACAATAATGGGAGGTGGAGGCCGTGTGGCCAAAGTTGAAATTCAGCAGAAGAAGCCTCTCTCAAGGGTTCCAAACACAAAGCCACCATTCACTGTTGGCCAACTCAAGAAAGCCATTCCACCGCACTGCTTTCAGCGTTCCCTCCTCACTTCATTGTCCTATGTTGTTTATGACCTTTCATTGGCTTTCATTTTCTACATTGCCACCACCTACTTCCACCTCCTCCCTCACCCCTTTTCCCTCATTGCATGGCCAATCTATTGGGTTCTCCAAGGTTGCATTCTTACTGGCGTGTGGGTGATTGCTCACGAGTGTGGTCACCATGCCTTCAGCAAGTACCCATGGGTTGATGATGTTATGGGTTTGACCGTTCACTCAGCACTTTTAGTCCCTTATTTCTCATGGAAAATAAGCCATCGCCGCCACCACTCCAACACGGGTTCCCTTGACCGTGATGAAGTGTTTGTCCCAAAACCAAAATCCAAAGTTGCATGGTACACCAAGTACCTGAACAACCCTCTAGGAAGGGCTGCTTCTCTTCTCATCACACTCACAATAGGGTGGCCTTTGTATTTAGCCTTCAATGTCTCTGGCAGACCCTATGATGGTTTTGCTAGCCACTACCACCCTTATGCTCCCATATATTCAAATCGTGAGAGGCTTTTGATCTATGTCTCTGATGTTGCTTTGTTTTCTGTGACTTACTTGCTCTACCGTGTTGCAACTATGAAAGGGTTGGTTTGGCTGCTATGTGTTTATGGGGTGCCATTGCTCATTGTGAACGGTTTTCTTGTGACCATCACATATCTGCAGCACACACACTATGCCTTGCCTCACTATGATTCATCAGAATGGGATTGGCTGAGGGGTGCTTTGGCAACTATGGACAGAGATTATGGAATTCTGAACAAGGTGTTTCACCACATAACTGATACTCATGTGGCTCACCATCTTTTCTCTACAATGCCACATTACCATGCAACGGAGGCAACCAATGCAATGAAGCCAATATTGGGTGAGTACTACCGATTTGATGACACACCATTTTACAAGGCACTGTGGAGAGAAGCAAGAGAGTGCCTCTATGTGGAGCCAGATGAAGGAACATCCGAGAAGGGCGTGTATTGGTACAGGAACAAGTATTGA
Predicted protein sequences of Glyma.20G111000
>Glyma.20g111000.2.p sequence-type=predicted peptide transcript=Glyma.20g111000.2 locus=Glyma.20g111000 id=Glyma.20g111000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLAKETIMGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

>Glyma.20g111000.3.p sequence-type=predicted peptide transcript=Glyma.20g111000.3 locus=Glyma.20g111000 id=Glyma.20g111000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

>Glyma.20g111000.4.p sequence-type=predicted peptide transcript=Glyma.20g111000.4 locus=Glyma.20g111000 id=Glyma.20g111000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLAKETIMGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*

>Glyma.20g111000.5.p sequence-type=predicted peptide transcript=Glyma.20g111000.5 locus=Glyma.20g111000 id=Glyma.20g111000.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLAKETIMGGGGRVAKVEIQQKKPLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSLSYVVYDLSLAFIFYIATTYFHLLPHPFSLIAWPIYWVLQGCILTGVWVIAHECGHHAFSKYPWVDDVMGLTVHSALLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWYTKYLNNPLGRAASLLITLTIGWPLYLAFNVSGRPYDGFASHYHPYAPIYSNRERLLIYVSDVALFSVTYLLYRVATMKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHYALPHYDSSEWDWLRGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY*






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