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Report for Sequence Feature Glyma.20G057700

Feature Type:gene_model
Chromosome:Gm20
Start:16894894
stop:16904449
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20G057700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G02970.1AT GDA1/CD39 nucleoside phosphatase family protein JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
PTHR11782Panther ADENOSINE/GUANOSINE DIPHOSPHATASE JGI N/AIEA
PTHR11782:SF17Panther SUBFAMILY NOT NAMED JGI N/AIEA
PF01150PFAM GDA1/CD39 (nucleoside phosphatase) family JGI N/AIEA
PWY-5687SoyCyc9 pyrimidine ribonucleotides interconversion Plant Metabolic Network ISS
PWY-7177SoyCyc9 UTP and CTP dephosphorylation II Plant Metabolic Network ISS
PWY-7184SoyCyc9 pyrimidine deoxyribonucleotides de novo biosynthesis I Plant Metabolic Network ISS
PWY-7185SoyCyc9 UTP and CTP dephosphorylation I Plant Metabolic Network ISS
PWY-7211SoyCyc9 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis Plant Metabolic Network ISS
PWY0-166SoyCyc9 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) Plant Metabolic Network ISS
GN7V-65067SoyCyc9-rxn nucleoside-diphosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.20G057700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.20G057700 not represented in the dataset
Glyma.20G057700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20G057700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g057700 Wm82.a4.v1ISS As supplied by JGI
Glyma20g05611 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.20G057700
>Glyma.20g057700.2 sequence-type=transcript locus=Glyma.20g057700 ID=Glyma.20g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTATTTGTTTCAATCAAATTTAGGTCACCTATGTTTGGTGAAGTTTTCTATGTGTTGTTCTATTGTAACCAAAATCTAAAATCCTTGTACAGGATATGGTATGGAAATCATTAGAGGAGCAACTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCTAGCAAAGGAAATATAATTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCAGATCTCCAATGCAAGTGATGTAAAACACCCACTCTTCCAACCAGATGGGAATTTCTCAGCATGCAGATAGATGCCTGCATCCACCTTGTAAAATTACTTCATCCTTTTATGAGTTATTAGGCGAACAAGATTCAGAAAGCTTCTTGTATACTTCTGAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGACTCTGATACCTCTTCCTAGAATTTGTTAGATTCAATTTTCCTCATTTTTGCAGAACATGCATGTTGATGTGCTTTTCATGTTCATCCAAAACATCTCAGAGAAACGTCTAAGCTCCAGGGCAACATTGATATTTACTTGGCAGATTACAGTGAAAGGACCATTCTCTGGAGTATGTAGAGATTGCTCATTGATATTTGGCTGTTTCATTGATATTTGTAATCTATAGGGGTGAGTAGTTAGATGGTTATGGTAAATTAGGTAGTTAATTAAATTTTACCTAGTATATAAGTCCCACTGTATCCTAATAGTTAATTGATTTTTTTTAATAATTTCGTCAAATTGATATTGAGTTTAATGTTTATCCATTGATAGTGTAAAACTGTTATATAATCATAAATCATCGTTTGAATTACTTAGATA

>Glyma.20g057700.3 sequence-type=transcript locus=Glyma.20g057700 ID=Glyma.20g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTATTTGTTTCAATCAAATTTAGGTCACCTATGTTTGGTGAAGTTTTCTATGTGTTGTTCTATTGTAACCAAAATCTAAAATCCTTGTACAGGATATGGTATGGAAATCATTAGAGGAGCAACTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCTAGCAAAGGAAATATAATTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCAGATCTCCAATGCAAGTGATGTAAAACACCCACTCTTCCAACCAGATGGGAATTTCTCAGCATGCAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGACTCTGATACCTCTTCCTAGAATTTGTTAGATTCAATTTTCCTCATTTTTGCAGAACATGCATGTTGATGTGCTTTTCATGTTCATCCAAAACATCTCAGAGAAACGTCTAAGCTCCAGGGCAACATTGATATTTACTTGGCAGATTACAGTGAAAGGACCATTCTCTGGAGTATGTAGAGATTGCTCATTGATATTTGGCTGTTTCATTGATATTTGTAATCTATAGGGGTGAGTAGTTAGATGGTTATGGTAAATTAGGTAGTTAATTAAATTTTACCTAGTATATAAGTCCCACTGTATCCTAATAGTTAATTGATTTTTTTTAATAATTTCGTCAAATTGATATTGAGTTTAATGTTTATCCATTGATAGTGTAAAACTGTTATATAATCATAAATCATCGTTTGAATTACTTAGATA

>Glyma.20g057700.4 sequence-type=transcript locus=Glyma.20g057700 ID=Glyma.20g057700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTATTTGTTTCAATCAAATTTAGGTCACCTATGTTTGGTGAAGTTTTCTATGTGTTGTTCTATTGTAACCAAAATCTAAAATCCTTGTACAGGATATGGTATGGAAATCATTAGAGGAGCAACTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCTAGCAAAGGAAATATAATTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCAGATCTCCAATGCAAGTGATGTAAAACACCCACTCTTCCAACCAGATGGGAATTTCTCAGCATGCAGGTCCGAAGCTCTGTCATTGTTAAAGAGAACAGAAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGACTCTGATACCTCTTCCTAGAATTTGTTAGATTCAATTTTCCTCATTTTTGCAGAACATGCATGTTGATGTGCTTTTCATGTTCATCCAAAACATCTCAGAGAAACGTCTAAGCTCCAGGGCAACATTGATATTTACTTGGCAGATTACAGTGAAAGGACCATTCTCTGGAGTATGTAGAGATTGCTCATTGATATTTGGCTGTTTCATTGATATTTGTAATCTATAGGGGTGAGTAGTTAGATGGTTATGGTAAATTAGGTAGTTAATTAAATTTTACCTAGTATATAAGTCCCACTGTATCCTAATAGTTAATTGATTTTTTTTAATAATTTCGTCAAATTGATATTGAGTTTAATGTTTATCCATTGATAGTGTAAAACTGTTATATAATCATAAATCATCGTTTGAATTACTTAGATA
Coding sequences of Glyma.20G057700
>Glyma.20g057700.1 sequence-type=CDS polypeptide=Glyma.20g057700.1.p locus=Glyma.20g057700 ID=Glyma.20g057700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTATGGAAATCATTAGAGGAGCAACTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCTAGCAAAGGAAATATAATTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCAGATCTCCAATGCAAGTGATGTAAAACACCCACTCTTCCAACCAGATGGGAATTTCTCAGCATGCAGGTCCGAAGCTCTGTCATTGTTAAAGAGAACAGAAGATAGATGCCTGCATCCACCTTGTAAAATTACTTCATCCTTTTATGAGTTATTAGGCGAACAAGATTCAGAAAGCTTCTTGTATACTTCTGAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGA

>Glyma.20g057700.2 sequence-type=CDS polypeptide=Glyma.20g057700.2.p locus=Glyma.20g057700 ID=Glyma.20g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAATTTCTCAGCATGCAGATAGATGCCTGCATCCACCTTGTAAAATTACTTCATCCTTTTATGAGTTATTAGGCGAACAAGATTCAGAAAGCTTCTTGTATACTTCTGAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGA

>Glyma.20g057700.3 sequence-type=CDS polypeptide=Glyma.20g057700.3.p locus=Glyma.20g057700 ID=Glyma.20g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGA

>Glyma.20g057700.4 sequence-type=CDS polypeptide=Glyma.20g057700.4.p locus=Glyma.20g057700 ID=Glyma.20g057700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTCCTAGGACTTCTTTGTTTCAATTGGAGGCAGAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGCCAACATTATTGTGAAGATCATTGGGATGCTCTTAAAAATCAGCATAATGAAGTTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGCTAGCATTACTGCATGATGTTCTTGGGATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGGACCAGAAAATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGCAATGAATCACTCACATATTTTTCATTATTTGCATTTCTTTTCTTATTCATACTTGCTGCATTCTTTGTAATGCAATGGAGAAAGCCACAATTGAAGACGGTATACGACCTCGAGAAGGGACGATATATTGTTACACGTTTACCCAAGTGA
Predicted protein sequences of Glyma.20G057700
>Glyma.20g057700.1.p sequence-type=predicted peptide transcript=Glyma.20g057700.1 locus=Glyma.20g057700 ID=Glyma.20g057700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVWKSLEEQLKYRELKLSSKSSKGNIINPCIPRGYEYPQISNASDVKHPLFQPDGNFSACRSEALSLLKRTEDRCLHPPCKITSSFYELLGEQDSESFLYTSEILRMAPRTSLFQLEAESQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKSQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKRVGFGDQKINSHVDWTLGSFIIETMAEPLELEHIDTGMIVGNESLTYFSLFAFLFLFILAAFFVMQWRKPQLKTVYDLEKGRYIVTRLPK*

>Glyma.20g057700.2.p sequence-type=predicted peptide transcript=Glyma.20g057700.2 locus=Glyma.20g057700 ID=Glyma.20g057700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGISQHADRCLHPPCKITSSFYELLGEQDSESFLYTSEILRMAPRTSLFQLEAESQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKSQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKRVGFGDQKINSHVDWTLGSFIIETMAEPLELEHIDTGMIVGNESLTYFSLFAFLFLFILAAFFVMQWRKPQLKTVYDLEKGRYIVTRLPK*

>Glyma.20g057700.3.p sequence-type=predicted peptide transcript=Glyma.20g057700.3 locus=Glyma.20g057700 ID=Glyma.20g057700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQILRMAPRTSLFQLEAESQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKSQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKRVGFGDQKINSHVDWTLGSFIIETMAEPLELEHIDTGMIVGNESLTYFSLFAFLFLFILAAFFVMQWRKPQLKTVYDLEKGRYIVTRLPK*

>Glyma.20g057700.4.p sequence-type=predicted peptide transcript=Glyma.20g057700.4 locus=Glyma.20g057700 ID=Glyma.20g057700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAPRTSLFQLEAESQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKSQHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKRVGFGDQKINSHVDWTLGSFIIETMAEPLELEHIDTGMIVGNESLTYFSLFAFLFLFILAAFFVMQWRKPQLKTVYDLEKGRYIVTRLPK*






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