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Report for Sequence Feature Glyma.20G044800

Feature Type:gene_model
Chromosome:Gm20
Start:8268501
stop:8275551
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.20G044800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G44060.1AT Late embryogenesis abundant protein, group 2 JGI N/AIEA
GO:0009269GO-bp response to desiccation EnsemblGenomesN/AIEA
GO:0009735GO-bp response to cytokinin EnsemblGenomesN/AIEA
GO:0046686GO-bp response to cadmium ion EnsemblGenomesN/AIEA
GO:0005794GO-cc Golgi apparatus EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0009506GO-cc plasmodesma EnsemblGenomesN/AIEA
PF03168PFAM Late embryogenesis abundant protein JGI N/AIEA

Proteins Associated with Glyma.20G044800
LocusGene SymbolProtein Name
LEA-2 late-embryogenesis abundant protein 1 gene 2
LEA2-101 late embryogenesis abundant 2 gene 101

Expression Patterns of Glyma.20G044800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.20G044800 not represented in the dataset
Glyma.20G044800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.20G044800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g044800 Wm82.a4.v1ISS As supplied by JGI
Glyma20g08680 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.20G044800
>Glyma.20g044800.1 sequence-type=CDS polypeptide=Glyma.20g044800.1.p locus=Glyma.20g044800 ID=Glyma.20g044800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTACATCTGATAAGTCAGAAGTGGTGGAAAGGGGTGCTAAGGATGATGAAAAGCCAAAGGAAGAACATGAGAAGGGTGGATTTCTTGATACAGTGAAGGATTTCATTCAAGACATTGGTGAGAAGATTGAGGGAGCAGTTGGGTTTGGGAAGCCAACTGCAGATGTCACTGGGATACACATTCCATCAATTAATCTTGAGAAGGCAGAGCTAGTTGTTGATGTTCTTATAAAGAACCCGAATCCGGTGCCAATTCCCCTAATTGACATAAACTACTTGGTCGAGAGTGATGGGAGGAAACTAGTTTCGGGATTGATACCAGATTCGGGCACAATCCATGCACATGGAGAGGAGACAGTCAAGATTCCTCTTACTTTGATTTTTGATGACATAAGGAATACCTATGATGATATTAAACCAGGAAGCATCATTCCTTATAGGGTGAAGGTTGATCTCATTGTGGATGTTCCTGTCTTTGGAAGGCTCACTCTACCTTTGGAGAAAACTGGAGAAATCCCCATTCCATACAAGCCTGATATTGATCTCGATAAAATTCAGTTTGAGAGGTTTTCTTTTGAAGAGACAGTTGCTATTCTTCATTTGAAGTTGGACAACAAGAATGACTTTGACCTTGGCCTCAATGCTCTTGATTATGAGGTCTGGCTTGGTGATGTTAGCATTGGAGGAGCAGAACTTGCCAAATCTGCAAAGCTCGTGAAAAGTGGGATTAGTGACATTGATGTTCCAATTACCTTCAGGCCTAAGGATTTTGGCTCTGCTCTTTGGGACATGATTAGAGGAAGGGGGACAGGCTACACTTTTAAAGGACATATTGATGTTGACACTCCCTTTGGAGCAATGAAACTGCCCATCACGAAAGAAGGTGGTACTACCCGTCTCAAGAAGAATGAAGACAGTGGAGATGACGAGGAGTGA
Predicted protein sequences of Glyma.20G044800
>Glyma.20g044800.1.p sequence-type=predicted peptide transcript=Glyma.20g044800.1 locus=Glyma.20g044800 ID=Glyma.20g044800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSTSDKSEVVERGAKDDEKPKEEHEKGGFLDTVKDFIQDIGEKIEGAVGFGKPTADVTGIHIPSINLEKAELVVDVLIKNPNPVPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPLTLIFDDIRNTYDDIKPGSIIPYRVKVDLIVDVPVFGRLTLPLEKTGEIPIPYKPDIDLDKIQFERFSFEETVAILHLKLDNKNDFDLGLNALDYEVWLGDVSIGGAELAKSAKLVKSGISDIDVPITFRPKDFGSALWDMIRGRGTGYTFKGHIDVDTPFGAMKLPITKEGGTTRLKKNEDSGDDEE*






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