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Report for Sequence Feature Glyma.20G035800

Feature Type:gene_model
Chromosome:Gm20
Start:5023078
stop:5025544
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G28300.1AT AP2/B3-like transcriptional factor family protein JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0003677GO-mf DNA binding EnsemblGenomesN/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PF02362PFAM B3 DNA binding domain JGI N/AIEA

LocusGene SymbolProtein Name
LEC2a B3 domain transcription factor

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.20G035800 not represented in the dataset

Glyma.20G035800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE


View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.



View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Corresponding NameAnnotation VersionEvidenceComments
Glyma.20g035800 Wm82.a4.v1ISS As supplied by JGI
Glyma20g04761 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.20g035800.1 sequence-type=CDS polypeptide=Glyma.20g035800.1.p locus=Glyma.20g035800 ID=Glyma.20g035800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAACTTTTTTGTGCCATTTTTAAAAAAAAACCCCAACCCATCAATCACCACTACTGGTGGCAATGGCTCATCTTCATCAAACCAAACAAGCCTTGTACAACCAAGCACATATCCTCAAAATTTCCCTTACAATACTAGTGTAAAACTTAACTTTCCAGAACAACCTTATTTCATTCCTTTGTATCCCTTTCCAACAGGACAAGTTAGCTTTTCTAATCAACCCTATGGAATGCCAAATTCGGAACTTCAAGGTTCGAGGGCATGCATGACCAAAGCTACAAGGGAGAGATGGAGACAAGTAAGACAAAGGAGTAAAAATTCTACTCTTGTCGCTCCTAATTCAGTTCTAGAAAGGACAACAAGAGAACAATTTGTTCCTAATGGAGGGTCAAATGTGAGGATCACAGTCAAACAACACAATGCAACCAAGTTTTTTAACACCCCAAACGGGAAGAAGCTAGAAGAAATTTTGACAAAGAAGTTGAATAATAGTGATGTTGGCGTCCTAGGCCGCATTGTGCTCCCAAAGAGAGAGGCTGAGGATAAGCTTCCGACACTGTGGAAGAAGGAAGGAATCAATATTGTACTAAAGGATGTATATTCTGAGATTGAATGGAGCATCAAATACAAGTACTGGACTAATAACAAAAGCAGAATGTATATTCTTGATAATACAGGGGATTTTGTTAACCATTATAAACTTCAAACAGGAGATTTCATAACCCTTTACAAGGACGAGTTGAAAAATCTGTATGTGTCGGCTCGAAAGGATCAAGAAAATCTAGAAGAATCTAAGTCCTCGTCAAACACAGGAATGTCACATGAACCAGATGCATATTTAGCTTACTTGACGAAGGAACTTAGCCATAAGGGGAAAGCAGAAGCTGCCAACAACCTTTTGAACAATGTTGAGGAAGAGGCACCAAATCAAGCAAATCAATTACATCAATTCATGCCGATGAACAATATTGTTGGGGAGGGGGCATCAAACCAAGCAATTCAAGAAGCCGCACCAGCCGCACCCGTCAATGTTAATCAAGAAAACAAAGTTGTTGACGACGATGATGATGATATCTATGGTGGCCTTGACAATATTTTCGAAATTGGAAATACTTATCAAATTTGGTAG

>Glyma.20g035800.1.p sequence-type=predicted peptide transcript=Glyma.20g035800.1 locus=Glyma.20g035800 ID=Glyma.20g035800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MENFFVPFLKKNPNPSITTTGGNGSSSSNQTSLVQPSTYPQNFPYNTSVKLNFPEQPYFIPLYPFPTGQVSFSNQPYGMPNSELQGSRACMTKATRERWRQVRQRSKNSTLVAPNSVLERTTREQFVPNGGSNVRITVKQHNATKFFNTPNGKKLEEILTKKLNNSDVGVLGRIVLPKREAEDKLPTLWKKEGINIVLKDVYSEIEWSIKYKYWTNNKSRMYILDNTGDFVNHYKLQTGDFITLYKDELKNLYVSARKDQENLEESKSSSNTGMSHEPDAYLAYLTKELSHKGKAEAANNLLNNVEEEAPNQANQLHQFMPMNNIVGEGASNQAIQEAAPAAPVNVNQENKVVDDDDDDIYGGLDNIFEIGNTYQIW*







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