Report for Sequence Feature Glyma.20G030500
Feature Type: gene_model
Chromosome: Gm20
Start: 3681098
stop: 3682240
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.20G030500
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G15130.1 AT
WRKY DNA-binding protein 72
JGI N/A IEA
GO:0006351 GO-bp
transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0006355 GO-bp
regulation of transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0006355 GO-bp
regulation of transcription, DNA-templated
JGI N/A IEA
GO:0005634 GO-cc
nucleus
EnsemblGenomes N/A IEA
GO:0003677 GO-mf
DNA binding
EnsemblGenomes N/A IEA
GO:0003700 GO-mf
DNA binding transcription factor activity
EnsemblGenomes N/A IEA
GO:0003700 GO-mf
sequence-specific DNA binding transcription factor activity
JGI N/A IEA
GO:0043565 GO-mf
sequence-specific DNA binding
EnsemblGenomes N/A IEA
GO:0043565 GO-mf
sequence-specific DNA binding
JGI N/A IEA
PF03106 PFAM
WRKY DNA -binding domain
JGI N/A IEA
Proteins Associated with Glyma.20G030500
Locus Gene Symbol Protein Name
WRKY187 WRKY Transcripiton Factor
Expression Patterns of Glyma.20G030500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Gene model name correspondences to Glyma.20G030500 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma20g03820 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.20G030500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.20g030500.1 sequence-type=CDS polypeptide=Glyma.20g030500.1.p locus=Glyma.20g030500 ID=Glyma.20g030500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAATGATGGGTGCCATTGGAGAAAATATGGACAGAAAATGGCCAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGCACTGCTTCTCCATCTTGTCTAGTAAGAAAACAAGTGCAAAGATGTGCTGAAGAAATGTCCATATTGATTACCACCTATGAAGGAACTCACAATCACCCTCTTCCTATGTCAGCCACTACAATGGCCTGCACAACTTCTGCTGCAGCTTCCATGCTCCAATCTCCCTCATTGAGTTCACAACATGGATTAGTTGATTCAGCTATATCCTCCATCATCAACTCTAGTGATCCTTATTACAACCCTAATAATGCTCTAAACTTCTCGACACACCAAGTTTCAAGACCACAACAATTCTACTTCCCCAACTCATCCATTTCAACCTTGAATTCTCACCCCACAATCACTTTAGACCTTACAACACCTCCAACTTCTTCCTCAAACTCAAGCTTCACTTGCATGCCAAAATACTGA
Predicted protein sequences of Glyma.20G030500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.20g030500.1.p sequence-type=predicted peptide transcript=Glyma.20g030500.1 locus=Glyma.20g030500 ID=Glyma.20g030500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNDGCHWRKYGQKMAKGNPCPRAYYRCTASPSCLVRKQVQRCAEEMSILITTYEGTHNHPLPMSATTMACTTSAAASMLQSPSLSSQHGLVDSAISSIINSSDPYYNPNNALNFSTHQVSRPQQFYFPNSSISTLNSHPTITLDLTTPPTSSSNSSFTCMPKY*