SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g246600

Feature Type:gene_model
Chromosome:Gm19
Start:49849256
stop:49853596
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g246600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G28640.1AT AN3,ATGIF1,GIF,GIF1 JGI N/AIEA
PTHR23107PantherFam SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN JGI N/AIEA
PF05030Pfam SSXT protein (N-terminal region) JGI N/AIEA

Gene model name correspondences to Glyma.19g246600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g43580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g246600
>Glyma.19g246600.1 sequence-type=CDS polypeptide=Glyma.19g246600.1.p locus=Glyma.19g246600 id=Glyma.19g246600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTACTACCCCAACAACGTCACCACTGATCACATTCAGCAGTATCTGGATGAGAACAAGTCCTTAATTCTGAAGATTGTTGAAAGCCAGAATTCTGGCAAGCTGAGCGAGTGTGCCGAGAACCAAGCAAGGCTTCAGAGAAATCTCATGTACTTAGCTGCAATAGCTGATTCTCAACCCCAACCACCCACCATGTCTGGTCAGTACCCTCCGAGTGGGATGATGCAGCAGGGAGCACAGTACATGCAGGCTCAACAACAGGCACAGCAGATGACACCACAACAACTAATGGCAGCACGCTCATCTCTTTTGTACGCACAGCAGCCGTACTCAGCACTTCAACAGCAGCAAGCCATGCACAGTGCACTGGGGTCGAGTTCGGGGCTCCACATGCTGCAAAGTGAAGGCAGCAATGTGAATGTGGGAGGAGGGTTTCCTGACTTTGTGCGTGGCGGCAGCTCCACAGGGGAGGGTTTGCACAGTGGTGGAAGGGGTATCATTGGAAGTAGCAAGCAGGAAATGGGGGGTTCAAGTGAAGGCCGCGGTGAAGGGGGTGAAAACCTCTACCTCAAAGTTGCTGATGATGGAAACTAG

>Glyma.19g246600.2 sequence-type=CDS polypeptide=Glyma.19g246600.2.p locus=Glyma.19g246600 id=Glyma.19g246600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACATGCTTCTCTTACTTTCAGACTTCAATTACGCCCTCTCTGACTGTTATCTGGATGAGAACAAGTCCTTAATTCTGAAGATTGTTGAAAGCCAGAATTCTGGCAAGCTGAGCGAGTGTGCCGAGAACCAAGCAAGGCTTCAGAGAAATCTCATGTACTTAGCTGCAATAGCTGATTCTCAACCCCAACCACCCACCATGTCTGGTCAGTACCCTCCGAGTGGGATGATGCAGCAGGGAGCACAGTACATGCAGGCTCAACAACAGGCACAGCAGATGACACCACAACAACTAATGGCAGCACGCTCATCTCTTTTGTACGCACAGCAGCCGTACTCAGCACTTCAACAGCAGCAAGCCATGCACAGTGCACTGGGGTCGAGTTCGGGGCTCCACATGCTGCAAAGTGAAGGCAGCAATGTGAATGTGGGAGGAGGGTTTCCTGACTTTGTGCGTGGCGGCAGCTCCACAGGGGAGGGTTTGCACAGTGGTGGAAGGGGTATCATTGGAAGTAGCAAGCAGGAAATGGGGGGTTCAAGTGAAGGCCGCGGTGAAGGGGGTGAAAACCTCTACCTCAAAGTTGCTGATGATGGAAACTAG

>Glyma.19g246600.3 sequence-type=CDS polypeptide=Glyma.19g246600.3.p locus=Glyma.19g246600 id=Glyma.19g246600.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACATGCTTCTCTTACTTTCAGACTTCAATTACGCCCTCTCTGACTGTTATCTGGATGAGAACAAGTCCTTAATTCTGAAGATTGTTGAAAGCCAGAATTCTGGCAAGCTGAGCGAGTGTGCCGAGAACCAAGCAAGGCTTCAGAGAAATCTCATGTACTTAGCTGCAATAGCTGATTCTCAACCCCAACCACCCACCATGTCTGGTCAGTACCCTCCGAGTGGGATGATGCAGCAGGGAGCACAGTACATGCAGGCTCAACAACAGGCACAGCAGATGACACCACAACAACTAATGGCAGCACGCTCATCTCTTTTGTACGCACAGCAGCCGTACTCAGCACTTCAACAGCAGCAAGCCATGCACAGTGCACTGGGGTCGAGTTCGGGGCTCCACATGCTGCAAAGTGAAGGCAGCAATGTGAATGTGGGAGGAGGGTTTCCTGACTTTGTGCGTGGCGGCAGCTCCACAGGGGAGGGTTTGCACAGTGGTGGAAGGGGTATCATTGGAAGTAGCAAGCAGGAAATGGGGGGTTCAAGTGAAGGCCGCGGTGAAGGGGGTGAAAACCTCTACCTCAAAGTTGCTGATGATGGAAACTAG
Predicted protein sequences of Glyma.19g246600
>Glyma.19g246600.1.p sequence-type=predicted peptide transcript=Glyma.19g246600.1 locus=Glyma.19g246600 id=Glyma.19g246600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMSGQYPPSGMMQQGAQYMQAQQQAQQMTPQQLMAARSSLLYAQQPYSALQQQQAMHSALGSSSGLHMLQSEGSNVNVGGGFPDFVRGGSSTGEGLHSGGRGIIGSSKQEMGGSSEGRGEGGENLYLKVADDGN*

>Glyma.19g246600.2.p sequence-type=predicted peptide transcript=Glyma.19g246600.2 locus=Glyma.19g246600 id=Glyma.19g246600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHMLLLLSDFNYALSDCYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMSGQYPPSGMMQQGAQYMQAQQQAQQMTPQQLMAARSSLLYAQQPYSALQQQQAMHSALGSSSGLHMLQSEGSNVNVGGGFPDFVRGGSSTGEGLHSGGRGIIGSSKQEMGGSSEGRGEGGENLYLKVADDGN*

>Glyma.19g246600.3.p sequence-type=predicted peptide transcript=Glyma.19g246600.3 locus=Glyma.19g246600 id=Glyma.19g246600.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHMLLLLSDFNYALSDCYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMSGQYPPSGMMQQGAQYMQAQQQAQQMTPQQLMAARSSLLYAQQPYSALQQQQAMHSALGSSSGLHMLQSEGSNVNVGGGFPDFVRGGSSTGEGLHSGGRGIIGSSKQEMGGSSEGRGEGGENLYLKVADDGN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo