SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g244600

Feature Type:gene_model
Chromosome:Gm19
Start:49703632
stop:49707000
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g244600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G28840.2AT GME JGI N/AIEA
5.1.3.18EC GDP-mannose 3,5-epimerase JGI N/AIEA
K10046KEGG Amino sugar and nucleotide sugar metabolism JGI N/AIEA
KOG1429 KOG dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase JGI N/AIEA
PTHR10366PantherFam NAD DEPENDENT EPIMERASE/DEHYDRATASE JGI N/AIEA
PF16363Pfam GDP-mannose 4,6 dehydratase JGI N/AIEA

Proteins Associated with Glyma.19g244600
LocusGene SymbolProtein Name
GME1 GDP-mannose 3',5'-epimerase

Gene model name correspondences to Glyma.19g244600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g43400 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g244600
>Glyma.19g244600.1 sequence-type=CDS polypeptide=Glyma.19g244600.1.p locus=Glyma.19g244600 id=Glyma.19g244600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAGTTCTGGAACAACCGACTATGGAGCATACACATACCAAAACCTTGAGAGGGAACCTTACTGGCCCTCTGAAAAGCTCAGAATTTCCATCACTGGGGCTGGTGGTTTCATTGCCTCACACATTGCTCGCCGCCTCAAGACCGAGGGACATTACATCATTGCTTCTGATTGGAAGAAGAATGAGCACATGACTGAGGACATGTTCTGCCATGAATTCCATCTTGTTGACCTTAGGGTCATGGATAACTGCTTGACAGTTACCAAGGGTGTGGACCATGTTTTCAATCTTGCTGCTGATATGGGTGGGATGGGTTTTATCCAGTCCAACCACTCAGTCATTATGTACAACAACACCATGATTAGCTTCAACATGATTGAGGCTGCCAGGATCAATGGTGTTAAGAGGTTTTTTTATGCCTCTAGTGCTTGTATCTATCCTGAATTCAAACAGTTGGAGACAAATGTGAGTTTGAAGGAGTCTGATGCCTGGCCTGCTGAGCCACAAGATGCATATGGGCTGGAGAAGCTTGCAACAGAAGAGTTATGCAAGCATTATAACAAGGATTTTGGAATTGAGTGCCGGATTGGGAGATTCCATAACATATATGGTCCTTATGGGACATGGAAGGGTGGAAGGGAGAAGGCTCCTGCTGCTTTTTGTCGCAAGACACTTACTTCCAAAGATCGATTTGAGATGTGGGGAGATGGATTGCAAACAAGATCCTTCACCTTCATTGATGAGTGTGTTGAAGGTGTACTGAGATTGACTAAATCAGACTTCCGGGAGCCAGTGAATATTGGAAGTGATGAAATGGTCAGTATGAATGAGATGGCAGAGATTGTTCTTAGCTTTGAGGATAAGAATATACCAATATACCATATTCCTGGCCCAGAAGGTGTTCGGGGCCGTAATTCAGACAATACATTAATCAAAGAGAAACTTGGCTGGGCTCCAACTATGAAGTTGAAGGATGGGCTGAGAATTACATACTTTTGGATCAAAGAGCAGCTTGAGAAAGAGAAGGCAGAAGGTGTTGATTTATCAGGCTATGGATCATCCAAAGTGGTTCAGACTCAAGCCCCAGTTCAACTTGGCTCGCTACGTGCTGCAGATGGCAAAGAATAA
Predicted protein sequences of Glyma.19g244600
>Glyma.19g244600.1.p sequence-type=predicted peptide transcript=Glyma.19g244600.1 locus=Glyma.19g244600 id=Glyma.19g244600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGSSGTTDYGAYTYQNLEREPYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLTVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPYGTWKGGREKAPAAFCRKTLTSKDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKNIPIYHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQLEKEKAEGVDLSGYGSSKVVQTQAPVQLGSLRAADGKE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo