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Report for Sequence Feature Glyma.19g240400

Feature Type:gene_model
Chromosome:Gm19
Start:49351677
stop:49355059
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g240400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G08830.2AT CSD1 JGI N/AIEA
1.15.1.1EC superoxide dismutase JGI N/AIEA
GO:0006801GO-bp superoxide metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K04565KEGG Pathways of neurodegeneration - multiple diseases JGI N/AIEA
KOG0441 KOG Cu2+/Zn2+ superoxide dismutase SOD1 JGI N/AIEA
PTHR10003PantherFam SUPEROXIDE DISMUTASE CU-ZN -RELATED JGI N/AIEA
PF00080Pfam Copper/zinc superoxide dismutase (SODC) JGI N/AIEA

Proteins Associated with Glyma.19g240400
LocusGene SymbolProtein Name
SOD1 superoxide dismutase [Cu-Zn]
SOD Super Oxide Dismutase

Gene model name correspondences to Glyma.19g240400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g42890 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g240400
>Glyma.19g240400.3 sequence-type=CDS polypeptide=Glyma.19g240400.3.p locus=Glyma.19g240400 id=Glyma.19g240400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGAAGGCTGTGGCAGTTCTTGGCAGCAGCGAGGGTGTCACTGGAACTATTTTCTTCACTCAGGAGGGAAATGGTCCAACCACCGTAACTGGATCTCTTGCTGGTCTTAAGCCTGGTCTCCATGGCTTCCATGTCCATGCCTTGGGGGACACTACCAATGGTTGCCTGTCAACTGGAGCGCATTTCAATCCTAATAACAACGAGCACGGTGCCCCTGAGGACGAGAATCGTCATGCTGGTGATCTTGGGAATGTTAATGTCGGTGATGATGGTACCGTTAGCTTCAGTATTACCGACAGTCAGATTCCTCTCACTGGACCAAACTCCATCATAGGAAGGGCTGTTGTTGTCCATGCTGATTCTGATGACCTTGGAAAAGGTGGTCATGAGCTTAGCAAAACTACTGGAAATGCTGGTGGCAGAGTAGCTTGTGGTATCATTGGTCTGCAAGGATAA
Predicted protein sequences of Glyma.19g240400
>Glyma.19g240400.3.p sequence-type=predicted peptide transcript=Glyma.19g240400.3 locus=Glyma.19g240400 id=Glyma.19g240400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKGGHELSKTTGNAGGRVACGIIGLQG*






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