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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G27380.1 | AT | glutathione synthetase 2 | JGI | N/A | IEA |
| GO:0006520 | GO-bp | cellular amino acid metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0006750 | GO-bp | glutathione biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0006750 | GO-bp | glutathione biosynthetic process | JGI | N/A | IEA |
| GO:0005829 | GO-cc | cytosol | EnsemblGenomes | N/A | IEA |
| GO:0000166 | GO-mf | nucleotide binding | EnsemblGenomes | N/A | IEA |
| GO:0000287 | GO-mf | magnesium ion binding | EnsemblGenomes | N/A | IEA |
| GO:0004363 | GO-mf | glutathione synthase activity | EnsemblGenomes | N/A | IEA |
| GO:0004363 | GO-mf | glutathione synthase activity | JGI | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| GO:0016874 | GO-mf | ligase activity | EnsemblGenomes | N/A | IEA |
| GO:0042803 | GO-mf | protein homodimerization activity | EnsemblGenomes | N/A | IEA |
| GO:0043295 | GO-mf | glutathione binding | EnsemblGenomes | N/A | IEA |
| GO:0046872 | GO-mf | metal ion binding | EnsemblGenomes | N/A | IEA |
| KOG0021 | KOG | Glutathione synthetase | JGI | N/A | IEA |
| PTHR11130 | Panther | GLUTATHIONE SYNTHETASE | JGI | N/A | IEA |
| PF03199 | PFAM | Eukaryotic glutathione synthase | JGI | N/A | IEA |
| PF03917 | PFAM | Eukaryotic glutathione synthase, ATP binding domain | JGI | N/A | IEA |
| GLUTATHIONESYN-PWY | SoyCyc9 | glutathione biosynthesis | Plant Metabolic Network | ISS | |
| PWY-4041 | SoyCyc9 | γ-glutamyl cycle | Plant Metabolic Network | ISS | |
| GN7V-61335 | SoyCyc9-rxn | glutathione synthase | Plant Metabolic Network | ISS |
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Glyma.19g237900 not represented in the dataset |
Glyma.19g237900 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma19g42620 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.19g237900.1 sequence-type=CDS polypeptide=Glyma.19g237900.1.p locus=Glyma.19g237900 ID=Glyma.19g237900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCTCAACATATTTATGGCATCTTCGACTACCATCGTCTTCATCAGCAATTCCTTCACACTATCGCCTACGATGCTCTCGTTTGGACCTCTCTCCACGGCCTCCTTGTTGGTGACAAATCCGTTCAGAGATCGGGAAGCGTTCCTGGCGTGGGATTGGTGCATGCCCCAGTTGCCTTGTTTCCCACGCCATTTCCGGAAAACCACTGGAGAGAAGCCTGTGAGTTAGCCCCTATATTCAATGAACTCGTTGATCGGGTCAGTTTGGATGCAACGTTTCTCCACGACTCTCTCTCCAGAACCAAGAAAGCGGATGAATTCACCTCTAGACTTTTGGATATTCATTCCATGATGATACAGATTAACAAAAAAGAGGAAATACGATTGGGGTTACATCGTTCAGATTATATGCTTGATGAAAAGACTAAATCACTTTTGCAAGTAGAACTGAACACTATTGCCTCTTCATTTGCGAGTCTTAGTAATCTTGTAACTGAACTTCATAGATACATACTTTCTTGCCATGGAAAATTGCTTGAACTAGATTCCAAAAGGATTCCTGCCAACGATGCTGTCAATCAGTATGCAGATGCCTTGGCTAAAGCTTGGAGTGAGTATAATAACCCCAGGGCTGTGATTATGATTGTGGTTCAGGCTGAAGAACGAAACATGTACGACCAGCATTTTGTTTCTGCACTTTATAACACGCATAATATTACAACTATACGGAAAACATTGACAGAAGTTGATCAAGAAGGAGAAATTCTACCAGATGGAACACTTTCTGTGGATGGAGAAGCAATTTCAGTCATTTATTTCCGAGCAGGCTATACACCAGACGACTATCCTTCAGAATCAGAATGGAGAGCTAGGCTACTGATGGAACAATCTTCTGCTGTCAAATGCCCTTCAATATCCTATCATTTGGTTGGCACCAAAAAGATTCAACAGGAACTTGCAAAGCCTGGTGTTCTTGAAAGGTTCCTTGATAACAAAGATGACATTGCCAAACTGCGTAAATGCTTTGCTGGGTTGTGGAGTTTGGATGACTCAAATATTGTTAGAAAAGCAATTGAAAGGCCCGAGTTATTTGTGATGAAGCCCCAAAGAGAAGGAGGAGGAAACAATATTTATGGTGATGATGTGAGGGAAACCCTCCTAAAGTTGCAGAAAGCAGATTCTCAAGAAGATGCAGCTTATATCCTTATGCAGAGGATATTTCCATCTATTTCTGCAACAGTTCTGTTGCGTAACGGTTGTTGGCATAAGGATCATGCCATTTCAGAACTTGGGATATTTGGTACTTATTTAAGGAATAAGAATAAGGTTATCATGAACGAACAAAGTGGTTATTTGATGCGTACAAAAGTATCATCATCTGACGAAGGTGGGGTTGCAGCTGGTTTTGCAGTGCTAGATAGTGTATACTTGACTTGA
>Glyma.19g237900.1.p sequence-type=predicted peptide transcript=Glyma.19g237900.1 locus=Glyma.19g237900 ID=Glyma.19g237900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSQHIYGIFDYHRLHQQFLHTIAYDALVWTSLHGLLVGDKSVQRSGSVPGVGLVHAPVALFPTPFPENHWREACELAPIFNELVDRVSLDATFLHDSLSRTKKADEFTSRLLDIHSMMIQINKKEEIRLGLHRSDYMLDEKTKSLLQVELNTIASSFASLSNLVTELHRYILSCHGKLLELDSKRIPANDAVNQYADALAKAWSEYNNPRAVIMIVVQAEERNMYDQHFVSALYNTHNITTIRKTLTEVDQEGEILPDGTLSVDGEAISVIYFRAGYTPDDYPSESEWRARLLMEQSSAVKCPSISYHLVGTKKIQQELAKPGVLERFLDNKDDIAKLRKCFAGLWSLDDSNIVRKAIERPELFVMKPQREGGGNNIYGDDVRETLLKLQKADSQEDAAYILMQRIFPSISATVLLRNGCWHKDHAISELGIFGTYLRNKNKVIMNEQSGYLMRTKVSSSDEGGVAAGFAVLDSVYLT*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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