SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g234400

Feature Type:gene_model
Chromosome:Gm19
Start:48927788
stop:48938505
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g234400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G05420.2AT ACBP4 JGI N/AIEA
GO:0000062GO-mf fatty-acyl-CoA binding JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG0379 KOG Kelch repeat-containing proteins JGI N/AIEA
PTHR23244PantherFam KELCH REPEAT DOMAIN JGI N/AIEA
PF00887Pfam Acyl CoA binding protein JGI N/AIEA
PF01344Pfam Kelch motif JGI N/AIEA
PF13415Pfam Galactose oxidase, central domain JGI N/AIEA

Gene model name correspondences to Glyma.19g234400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g42270 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g234400
>Glyma.19g234400.1 sequence-type=CDS polypeptide=Glyma.19g234400.1.p locus=Glyma.19g234400 id=Glyma.19g234400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGAGAGCAAGTTCTGGTCTGCAATACCCAGAGCGGTTCTACGCTGCGGCGTCTTATGTGGGGTTTGATGGATCCTCTCCAACCAAATCCCTCACCTCCAAATTCCCCCAGTCCACCGCTCTTCTTCTCTACAGCTTGTACCAACAGGCTAGTGTAGGACCTTGTAACATCACAGAACCCAGTACATGGAAAATTGTGGAGCATGGCAAATGGGCCAGTTGGAACCAGCTTGGAAACATGTCCTCAACTGAAGCCATGCGTCTTTTTGTAAAAATATTGGAGGAAGAAGATCCTGGTTGGTATTCAAGATTATCTAACTCTGTTGTAGAACCTGTCGTAGACGTGCAAATGAATCATAATTCCAAAGTTGAGCCAGTAATTGAGAATGGAAACTCTTATCCAGAGACAAAGACTATTTCTATTTCCACTCAAAATGGAAGTGAAGTTGGAACACAGGATAAAGATACTGTTGTGGAAGGCTTTGGTTCAGTTGAAGTATATGATCAATGGATTGCACCTCCAGTATCTGGAGGAAGTCCAAAAGCCCGATATGAGCATGGAGCTGCAGTCGTGCAAGATAAACTGTACATATATGGTGGAAATCACAATGGTCGATACCTTAATGATCTTCATGTTTTGGATTTGAGAAGTTGGACTTGGTCAAAGATTGAAGCTAAGACTGGAGTTGAGTCCCCAACAACTTCAATCCCTTGTGCTGGCCATTCATTGATTCCATGGGGAAATAAACTTTTGTCAATTGCAGGGCATACAAAAGATCCTTCTGAAAGTATCCAAGTGAAAGTGTTTGATCTTCAAATGGCTACATGGTCAACTCCAAAGATTTTTGGGAAAGCTCCGGTATCACGTGGAGGCCAATCAGTGAACCTTGTTGGGAAAACCTTAGTAATTTTTGGTGGGCAAGATGCAAAAAGGACTCTCTTGAATGATCTTCATATTCTTGACTTGGAAACCATGACATGGGACGAAATTGATGCTGTTGGGGTGCCGCCTTCTCCAAGGTCTGATCATACTGCTGCTGTACATGTGGAGCGATACTTACTTATCTTTGGTGGGGGTTCGCATGCAACATGCTACAATGATTTACATGTTCTTGATTTGCAAACTATGGAATGGTCTCGCCCCATGCAGCTAGGTGAAATACCAACACCACGTGCTGGACATGCTGGTGTGACAGTAGGGGAGAACTGGTTCATTGTTGGTGGTGGTGACAATAAGAGTGGGGTCTCTGAGACGATTGTACTGAATATGTCTACACTGGCTTGGTCAGTGGTAACTTCTGTTCAAGGACGAGTTCCTGTTGCCAGTGAGGGATTGAGTTTGGTTGTAAGCTCCTATGATGGTGAAGATGTACTTGTATCTTTTGGAGGGTACAATGGACGTTACAACAATGAGGTCTATGTTCTTAAACCAAGCCACAAATCAACCTTGCAATCCAAAATAATTGAAAATTCCATACCAGACAGTGTTTCAGCTATCCCAAATGTCACAAATGTGGAGTCTGAATTTGAAGCAGGCCATGATTCTAATCCACCAAAATCCAAAGGTGATATTGTATCAGTCTTGAAGGCTGAGAAAGAAGAGTTGGAATCATCACTGATCAAGGAGAAGCATCATGCTCTTCAACTAAAGCAAGATCTGGCAGAAGCTGAGTCTTGTAACTCTGACCTTTACAAGGAGCTCCAATCAGTTCGGGGTCAGCTTGCATCTGAGCAATCGAGGTGTTTCAAACTCGAGGTGGAGGTTGCTGAATTAGGTCAGAAGCTCCAAACGATTGGGACATTACAGAAGGAGCTAGAGCTTCTTCAGCGGCAGAAGGCTGCATCAGAGCAAGCTGCCTTAAATGCAAAACAGAGGCAGAGTTCAGGTGGCGTGTGGGGTTGGCTTGCTGGTACACCTCCCCCTATCCAGAATGCAGATGATGCATGA
Predicted protein sequences of Glyma.19g234400
>Glyma.19g234400.1.p sequence-type=predicted peptide transcript=Glyma.19g234400.1 locus=Glyma.19g234400 id=Glyma.19g234400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARASSGLQYPERFYAAASYVGFDGSSPTKSLTSKFPQSTALLLYSLYQQASVGPCNITEPSTWKIVEHGKWASWNQLGNMSSTEAMRLFVKILEEEDPGWYSRLSNSVVEPVVDVQMNHNSKVEPVIENGNSYPETKTISISTQNGSEVGTQDKDTVVEGFGSVEVYDQWIAPPVSGGSPKARYEHGAAVVQDKLYIYGGNHNGRYLNDLHVLDLRSWTWSKIEAKTGVESPTTSIPCAGHSLIPWGNKLLSIAGHTKDPSESIQVKVFDLQMATWSTPKIFGKAPVSRGGQSVNLVGKTLVIFGGQDAKRTLLNDLHILDLETMTWDEIDAVGVPPSPRSDHTAAVHVERYLLIFGGGSHATCYNDLHVLDLQTMEWSRPMQLGEIPTPRAGHAGVTVGENWFIVGGGDNKSGVSETIVLNMSTLAWSVVTSVQGRVPVASEGLSLVVSSYDGEDVLVSFGGYNGRYNNEVYVLKPSHKSTLQSKIIENSIPDSVSAIPNVTNVESEFEAGHDSNPPKSKGDIVSVLKAEKEELESSLIKEKHHALQLKQDLAEAESCNSDLYKELQSVRGQLASEQSRCFKLEVEVAELGQKLQTIGTLQKELELLQRQKAASEQAALNAKQRQSSGGVWGWLAGTPPPIQNADDA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo