Glyma.19g229100

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Report for Sequence Feature Glyma.19g229100

Feature Type:	gene_model
Chromosome:	Gm19
Start:	48027866
stop:	48030958
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.19g229100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G62630.1	AT	Protein of unknown function (DUF1645)	JGI	N/A	IEA
PF07816	PFAM	Protein of unknown function (DUF1645)	JGI	N/A	IEA

Expression Patterns of Glyma.19g229100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.19g229100

Paralog	Evidence	Comments
Glyma.03g232100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.19g229100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma19g41700	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.19g229100

Limit To All Plant Sequences

>Glyma.19g229100.1 sequence-type=CDS polypeptide=Glyma.19g229100.1.p locus=Glyma.19g229100 ID=Glyma.19g229100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAACCTCCGTCTGAAAGTCTAGGCCCTCCTCCATCACCATTCACCGCAGTTGCTTCTGCCACCATAGGTGCCCTCCATAGGTCACCGTTCATTGCTTTTGCGTTGAAGCAATTGTTCAAGTTGCAGGCTTTTGCACCTTCCTCTCTCTCGGGACAAGAGAGCAGAATAATGGAGGAGCTCCAAACCCCAAGCTATAATGGCCAAACCGAAAACCCAGACACTCTCCTCTTCGAAGACATTGACAGCACCTGCTCCACTCCCTACGTCAGCGCCCCTTCCAGTCCCGGCCGGGGACCCATCTCCGCCGCCGGAGGAGGGTTCTTCTACAGTGCTCCGGCTAGCCCAATGCACTTCACCATAACCGCCGCTTCCACTTACACACACTCAGCCTCTTCTTCCTCGGAAAAAAACTCTGGTTGCGATTTTGAGTTCTCGGCCCGGTTCGTTTCGAGCGGGTTTACTGGTTCCGGTTCGATGAGCTCGGCGGACGAGCTGTTCTTGAACGGTCAGATCCGGCCCATGAAGCTCTCGACCCACTTGGAGCGGCCGCAGGTCTTAGCTCCCTTGCTGGATCTCGAAGAAGAGGGCGAAGAAAACGAGGAAGTTGAAGCCAGTGTACGGGGTAGAGATCTGAGGCTGCGCGACAAATCACTCCGCAGAAGGACCAGATCCCTGTCACCTCTTCGGAACACGCCGTTAGAGTGGACGGAGAACGAGGAAAAAACGGAAAAGAAGGAAAACGTGGACCCTTCCGTTTCGAGCGGAAGTGGAAGGAGTTCCAAGAGGTGGGTTTTCTTGAGGGATTTCTTAAGAAGCAAAAGCGAGGGAAGGAGTAATAACAAGTTCTGGTCCACTATTTCCTTTTCCCCCGCCGCAAAGGACAAGAAGCCCCAAAATCAGGGAAATGGGCCGCAGAAGCCCAAGAAGGTCGCCGGAAAGCCCACTAACGGCATCGGGAAGAAGCGAGTGCCGGCGGCGTCGCCGCACGAGTTGCATTATAAAGCCAACAGAGCGCAAGCGGAGGAGTTGAGAAGGAAAACTTTTTTGCCTTATAGGCAGGGCTTGCTTGGGTGCTTGGGATTTAGTTCCAAAGGTTATGGTGCCATGAGTGGCTTTGCTAGAGCCTTAAACCCCGTCTCTTCCAGGTAA

Predicted protein sequences of Glyma.19g229100

Limit To All Plant Sequences

>Glyma.19g229100.1.p sequence-type=predicted peptide transcript=Glyma.19g229100.1 locus=Glyma.19g229100 ID=Glyma.19g229100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEPPSESLGPPPSPFTAVASATIGALHRSPFIAFALKQLFKLQAFAPSSLSGQESRIMEELQTPSYNGQTENPDTLLFEDIDSTCSTPYVSAPSSPGRGPISAAGGGFFYSAPASPMHFTITAASTYTHSASSSSEKNSGCDFEFSARFVSSGFTGSGSMSSADELFLNGQIRPMKLSTHLERPQVLAPLLDLEEEGEENEEVEASVRGRDLRLRDKSLRRRTRSLSPLRNTPLEWTENEEKTEKKENVDPSVSSGSGRSSKRWVFLRDFLRSKSEGRSNNKFWSTISFSPAAKDKKPQNQGNGPQKPKKVAGKPTNGIGKKRVPAASPHELHYKANRAQAEELRRKTFLPYRQGLLGCLGFSSKGYGAMSGFARALNPVSSR*

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