Glyma.19g225500

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Report for Sequence Feature Glyma.19g225500

Feature Type:	gene_model
Chromosome:	Gm19
Start:	47743727
stop:	47748610
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.19g225500

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G11910.1	AT	aspartic proteinase A1	JGI	N/A	IEA
GO:0006508	GO-bp	proteolysis	EnsemblGenomes	N/A	IEA
GO:0006508	GO-bp	proteolysis	JGI	N/A	IEA
GO:0006629	GO-bp	lipid metabolic process	EnsemblGenomes	N/A	IEA
GO:0006629	GO-bp	lipid metabolic process	JGI	N/A	IEA
GO:0030163	GO-bp	protein catabolic process	EnsemblGenomes	N/A	IEA
GO:0004190	GO-mf	aspartic-type endopeptidase activity	EnsemblGenomes	N/A	IEA
GO:0004190	GO-mf	aspartic-type endopeptidase activity	JGI	N/A	IEA
GO:0008233	GO-mf	peptidase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
KOG1339	KOG	Aspartyl protease	JGI	N/A	IEA
PTHR13683	Panther	ASPARTYL PROTEASES	JGI	N/A	IEA
PTHR13683:SF85	Panther		JGI	N/A	IEA
PF00026	PFAM	Eukaryotic aspartyl protease	JGI	N/A	IEA
PF03489	PFAM	Saposin-like type B, region 2	JGI	N/A	IEA
PF05184	PFAM	Saposin-like type B, region 1	JGI	N/A	IEA

Proteins Associated with Glyma.19g225500

Locus	Gene Symbol	Protein Name
	SOYAP2	aspartic proteinase 2

Expression Patterns of Glyma.19g225500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g225500 not represented in the dataset	Glyma.19g225500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.19g225500

Paralog	Evidence	Comments
Glyma.03g228200	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.19g225500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma19g41320	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.19g225500

Limit To All Plant Sequences

>Glyma.19g225500.2 sequence-type=transcript locus=Glyma.19g225500 ID=Glyma.19g225500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAGTTACTGCTAACTAACGAATGGACATCCATTCAATTATTATTTATTCGTTACGACCTTCCACCTTTTTCTTGTGTGTGCGTTCCTAACATTATTGTTTCCTACCAAGTTCTCTGTCTGGGGAGTTCTTAGCACCACCACCAGCTTCTGCAGTAGCTTTAAGCTACGAAAGGCAGATTTTCCTTGACCATGGGGCAAAAGCATTTAGTGACGGTGTTCTGTTTATGGGCTTTAACATGTTCCCTTCTTCCATCTTTCTCCTTTGGAATTCTGAGAATTGGTTTGAAGAAGAGACCTCTAGATCTTGATAGTATTAATGCTGCTAGAAAGGCAAGAGAAGGTCTAAGATCTGTAAGACCAATGATGGGTGCACATGATCAGTTTATTGGTAAGTCAAAAGGTGAAGATATAGTACCTTTGAAGAATTATTTGGACGCTCAATATTTTGGTGAGATTGGAATTGGCACACCCCCACAGCCCTTCACTGTAGTGTTTGACACTGGGAGTTCCAACCTTTGGGTTCCATCATCAAAGTGCTACTTTACTCTTGCTTGCTATACCCATAATTGGTACACGGCTAAGAAATCAAAGACACATGTCAAAAATGGAACTTCATGTAAAATAAACTATGGAACTGGATCAATATCTGGTTTCTTCAGTCAAGATAATGTTAAAGTTGGCAGTGCTGTTGTCAAGCATCAGGATTTCATTGAGGCTACCCACGAAGGAAGTCTTACCTTTCTGTCAGCAAAGTTCGATGGAATACTGGGACTTGGATTTCAGGAGATCTCAGTTGAAAATGCTGTGCCCGTATGGTTCAAAATGGTGGAGCAAAAACTTATCAGTGAGAAGGTGTTCTCTTTTTGGCTTAATGGGGATCCGAATGCGAAAAAAGGTGGTGAATTAGTTTTTGGTGGTGTTGACCCAAAGCACTTCAAAGGAAACCACACTTATGTTCCAATTACTGAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTTCGTTGGAGGTGTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACTCCTGTTGTGGCTGAAATCAACCATGCCATTGGAGCTGAAGGAGTTCTCAGTGTAGAATGTAAGGAAGTCGTTTCTCAATATGGAGAGTTGATATGGGATCTCTTGGTATCAGGGGTGAAACCAGATGACATATGTTCACAAGTTGGTTTATGTTCTTCCAAAAGGCATCAATCTAAGAGTGCTGGAATTGAAATGGTGACTGAAAAGGAACAGGAAGAGTTGGCAGCGAGAGATACTCCTTTGTGTTCTTCTTGTCAGATGCTTGTTCTTTGGATCCAGAATCAACTAAAACAAAAGGCAACGAAGGACAGAGTATTCAACTATGTGAATCAACTGTGTGAGAGCCTGCCAAGTCCATCTGGAGAGTCAGTGATAAGCTGTAATAGTCTTTCCAAGATGCCAAACATTACGTTCACAATTGGAAATAAACCTTTTGTCCTCACACCAGAGCAGTATATTCTAAGAACTGGAGAAGGCATTACAGAAGTCTGCCTTAGTGGGTTTATTGCTTTTGATGTTCCTCCTCCAAAGGGTCCATTGTGGATTCTTGGCGATGTTTTCATGAGGGCATATCACACCGTCTTTGACTATGGAAATCTCCAAGTTGGCTTTGCCGAAGCAGTCTAATTACGCTTTCTGGAGGATTTTCTTTGTAAATTTGTTAAGCGTGTTGTAAATAAGCTGTTATAATTGTAGCTCTGGTTACTTTTTGAAACCACGAATGTATTTATCCATTTAAGACGTAGAAGTATCCCACTTGCAAGTGTTGTGTGCTTTTTATATGAAAAAACCATCCTCATTTCATTCCGTGTTTGACCAAATATTGTGCCCTTTCTGTCCTTTTCAATTAGGATACTTGTAATGTGCCATACCCATGCGAAATCTTATTCTTCTTTCACCTGAGTTCCAATGGATAACTACTATTGGCATTATCTGCCAACAGAAACGAAAGGAGAATTGAAAAGGCAAAACCAATTGCAAAATGGTCGCAGAAAGGTTTTGGCTTTTCTCTTTTGTTACAGAAAGGTTTCGGCTT

Coding sequences of Glyma.19g225500

Limit To All Plant Sequences

>Glyma.19g225500.1 sequence-type=CDS polypeptide=Glyma.19g225500.1.p locus=Glyma.19g225500 ID=Glyma.19g225500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGCAAAAGCATTTAGTGACGGTGTTCTGTTTATGGGCTTTAACATGTTCCCTTCTTCCATCTTTCTCCTTTGGAATTCTGAGAATTGGTTTGAAGAAGAGACCTCTAGATCTTGATAGTATTAATGCTGCTAGAAAGGCAAGAGAAGGTCTAAGATCTGTAAGACCAATGATGGGTGCACATGATCAGTTTATTGGTAAGTCAAAAGGTGAAGATATAGTACCTTTGAAGAATTATTTGGACGCTCAATATTTTGGTGAGATTGGAATTGGCACACCCCCACAGCCCTTCACTGTAGTGTTTGACACTGGGAGTTCCAACCTTTGGGTTCCATCATCAAAGTGCTACTTTACTCTTGCTTGCTATACCCATAATTGGTACACGGCTAAGAAATCAAAGACACATGTCAAAAATGGAACTTCATGTAAAATAAACTATGGAACTGGATCAATATCTGGTTTCTTCAGTCAAGATAATGTTAAAGTTGGCAGTGCTGTTGTCAAGCATCAGGATTTCATTGAGGCTACCCACGAAGGAAGTCTTACCTTTCTGTCAGCAAAGTTCGATGGAATACTGGGACTTGGATTTCAGGAGATCTCAGTTGAAAATGCTGTGCCCGTATGGTTCAAAATGGTGGAGCAAAAACTTATCAGTGAGAAGGTGTTCTCTTTTTGGCTTAATGGGGATCCGAATGCGAAAAAAGGTGGTGAATTAGTTTTTGGTGGTGTTGACCCAAAGCACTTCAAAGGAAACCACACTTATGTTCCAATTACTGAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTTCGTTGGAGGTGTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACTCCTGTTGTGGCTGAAATCAACCATGCCATTGGAGCTGAAGGAGTTCTCAGTGTAGAATGTAAGGAAGTCGTTTCTCAATATGGAGAGTTGATATGGGATCTCTTGGTATCAGGGGTGAAACCAGATGACATATGTTCACAAGTTGGTTTATGTTCTTCCAAAAGGCATCAATCTAAGAGTGCTGGAATTGAAATGGTGACTGAAAAGGAACAGGAAGAGTTGGCAGCGAGAGATACTCCTTTGTGTTCTTCTTGTCAGATGCTTGTTCTTTGGATCCAGAATCAACTAAAACAAAAGGCAACGAAGGACAGAGTATTCAACTATGTGAATCAACTGTGTGAGAGCCTGCCAAGTCCATCTGGAGAGTCAGTGATAAGCTGTAATAGTCTTTCCAAGATGCCAAACATTACGTTCACAATTGGAAATAAACCTTTTGTCCTCACACCAGAGCAGTATATTCTAAGAACTGGAGAAGGCATTACAGAAGTCTGCCTTAGTGGGTTTATTGCTTTTGATGTTCCTCCTCCAAAGGGTCCATTGTGGATTCTTGGCGATGTTTTCATGAGGGCATATCACACCGTCTTTGACTATGGAAATCTCCAAGTTGGCTTTGCCGAAGCAGTCTAA

>Glyma.19g225500.2 sequence-type=CDS polypeptide=Glyma.19g225500.2.p locus=Glyma.19g225500 ID=Glyma.19g225500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGCAAAAGCATTTAGTGACGGTGTTCTGTTTATGGGCTTTAACATGTTCCCTTCTTCCATCTTTCTCCTTTGGAATTCTGAGAATTGGTTTGAAGAAGAGACCTCTAGATCTTGATAGTATTAATGCTGCTAGAAAGGCAAGAGAAGGTCTAAGATCTGTAAGACCAATGATGGGTGCACATGATCAGTTTATTGGTAAGTCAAAAGGTGAAGATATAGTACCTTTGAAGAATTATTTGGACGCTCAATATTTTGGTGAGATTGGAATTGGCACACCCCCACAGCCCTTCACTGTAGTGTTTGACACTGGGAGTTCCAACCTTTGGGTTCCATCATCAAAGTGCTACTTTACTCTTGCTTGCTATACCCATAATTGGTACACGGCTAAGAAATCAAAGACACATGTCAAAAATGGAACTTCATGTAAAATAAACTATGGAACTGGATCAATATCTGGTTTCTTCAGTCAAGATAATGTTAAAGTTGGCAGTGCTGTTGTCAAGCATCAGGATTTCATTGAGGCTACCCACGAAGGAAGTCTTACCTTTCTGTCAGCAAAGTTCGATGGAATACTGGGACTTGGATTTCAGGAGATCTCAGTTGAAAATGCTGTGCCCGTATGGTTCAAAATGGTGGAGCAAAAACTTATCAGTGAGAAGGTGTTCTCTTTTTGGCTTAATGGGGATCCGAATGCGAAAAAAGGTGGTGAATTAGTTTTTGGTGGTGTTGACCCAAAGCACTTCAAAGGAAACCACACTTATGTTCCAATTACTGAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTTCGTTGGAGGTGTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACTCCTGTTGTGGCTGAAATCAACCATGCCATTGGAGCTGAAGGAGTTCTCAGTGTAGAATGTAAGGAAGTCGTTTCTCAATATGGAGAGTTGATATGGGATCTCTTGGTATCAGGGGTGAAACCAGATGACATATGTTCACAAGTTGGTTTATGTTCTTCCAAAAGGCATCAATCTAAGAGTGCTGGAATTGAAATGGTGACTGAAAAGGAACAGGAAGAGTTGGCAGCGAGAGATACTCCTTTGTGTTCTTCTTGTCAGATGCTTGTTCTTTGGATCCAGAATCAACTAAAACAAAAGGCAACGAAGGACAGAGTATTCAACTATGTGAATCAACTGTGTGAGAGCCTGCCAAGTCCATCTGGAGAGTCAGTGATAAGCTGTAATAGTCTTTCCAAGATGCCAAACATTACGTTCACAATTGGAAATAAACCTTTTGTCCTCACACCAGAGCAGTATATTCTAAGAACTGGAGAAGGCATTACAGAAGTCTGCCTTAGTGGGTTTATTGCTTTTGATGTTCCTCCTCCAAAGGGTCCATTGTGGATTCTTGGCGATGTTTTCATGAGGGCATATCACACCGTCTTTGACTATGGAAATCTCCAAGTTGGCTTTGCCGAAGCAGTCTAA

Predicted protein sequences of Glyma.19g225500

Limit To All Plant Sequences

>Glyma.19g225500.1.p sequence-type=predicted peptide transcript=Glyma.19g225500.1 locus=Glyma.19g225500 ID=Glyma.19g225500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGQKHLVTVFCLWALTCSLLPSFSFGILRIGLKKRPLDLDSINAARKAREGLRSVRPMMGAHDQFIGKSKGEDIVPLKNYLDAQYFGEIGIGTPPQPFTVVFDTGSSNLWVPSSKCYFTLACYTHNWYTAKKSKTHVKNGTSCKINYGTGSISGFFSQDNVKVGSAVVKHQDFIEATHEGSLTFLSAKFDGILGLGFQEISVENAVPVWFKMVEQKLISEKVFSFWLNGDPNAKKGGELVFGGVDPKHFKGNHTYVPITEKGYWQIEMGDFFVGGVSTGVCEGGCAAIVDSGTSLLAGPTPVVAEINHAIGAEGVLSVECKEVVSQYGELIWDLLVSGVKPDDICSQVGLCSSKRHQSKSAGIEMVTEKEQEELAARDTPLCSSCQMLVLWIQNQLKQKATKDRVFNYVNQLCESLPSPSGESVISCNSLSKMPNITFTIGNKPFVLTPEQYILRTGEGITEVCLSGFIAFDVPPPKGPLWILGDVFMRAYHTVFDYGNLQVGFAEAV*

>Glyma.19g225500.2.p sequence-type=predicted peptide transcript=Glyma.19g225500.2 locus=Glyma.19g225500 ID=Glyma.19g225500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGQKHLVTVFCLWALTCSLLPSFSFGILRIGLKKRPLDLDSINAARKAREGLRSVRPMMGAHDQFIGKSKGEDIVPLKNYLDAQYFGEIGIGTPPQPFTVVFDTGSSNLWVPSSKCYFTLACYTHNWYTAKKSKTHVKNGTSCKINYGTGSISGFFSQDNVKVGSAVVKHQDFIEATHEGSLTFLSAKFDGILGLGFQEISVENAVPVWFKMVEQKLISEKVFSFWLNGDPNAKKGGELVFGGVDPKHFKGNHTYVPITEKGYWQIEMGDFFVGGVSTGVCEGGCAAIVDSGTSLLAGPTPVVAEINHAIGAEGVLSVECKEVVSQYGELIWDLLVSGVKPDDICSQVGLCSSKRHQSKSAGIEMVTEKEQEELAARDTPLCSSCQMLVLWIQNQLKQKATKDRVFNYVNQLCESLPSPSGESVISCNSLSKMPNITFTIGNKPFVLTPEQYILRTGEGITEVCLSGFIAFDVPPPKGPLWILGDVFMRAYHTVFDYGNLQVGFAEAV*

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