Glyma.19g208300

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Report for Sequence Feature Glyma.19g208300

Feature Type:	gene_model
Chromosome:	Gm19
Start:	46322663
stop:	46329649
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.19g208300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G03000.1	AT	peroxin 6	JGI	N/A	IEA
GO:0006281	GO-bp	DNA repair	JGI	N/A	IEA
GO:0006310	GO-bp	DNA recombination	JGI	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
GO:0009378	GO-mf	four-way junction helicase activity	JGI	N/A	IEA
KOG0736	KOG	Peroxisome assembly factor 2 containing the AAA+-type ATPase domain	JGI	N/A	IEA
PTHR23077	Panther	AAA-FAMILY ATPASE	JGI	N/A	IEA
PTHR23077:SF9	Panther	PEROXISOME ASSEMBLY FACTOR 2	JGI	N/A	IEA
PF00004	PFAM	ATPase family associated with various cellular activities (AAA)	JGI	N/A	IEA

Expression Patterns of Glyma.19g208300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g208300 not represented in the dataset	Glyma.19g208300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.19g208300

Paralog	Evidence	Comments
Glyma.03g211100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.19g208300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma19g39580	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.19g208300

Limit To All Plant Sequences

>Glyma.19g208300.2 sequence-type=transcript locus=Glyma.19g208300 ID=Glyma.19g208300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CGGCATAATATTATTCCCAGGATAGAAGAAGGCATGAATCGATGAAGTAGCCCGCTCTCATAACAAACCACCAACGACCAACATTGGGAAAGGCAAAGAAAAAATTGGTGGAAGAAAGAAGCTAAGGTAGAAAAAAGCAGAGCTTTAGATTGAAAAAAATGGTGGAAAGGAGGAGAAAGCCTCTGATACTGTGTTCCACCAAACATCTCATAAATTCCACTGTTCCAACCAACAACCTCTTCCCCCATGAATCTCTTCCCACTTTCCGTTTACCCGTTGGGATTCTCCGATTCTCCAACCCCGCAAACCCCTCTCTCGACCACTCTGCACTTCTCGCTCTCTCCACTAGTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCTCCGGTTTTGGTCAAGAATGTTGATACGAATACACAGAAAATTGCAGTGGCTATTGCTCTTGATCCACCAGGCACCGCCACTAATATGGACTCACCCTCTTCTTCAAATTCTCGAATAATGCTTGTTTTTCCTTCTTGTGATTTCCCTTCTAGTGGTTCTGTGTTAGATGATCAAGTAGCTTATATATCTCCTCTTTTAGCCTTTAACCTTAACTTGCACGTGACATGCTTAAAATCTATTCTTCACCACGGGCAAGATGCTTTAGCTTCTTATTTCAAAAGGGGTGATGAGGATGCCACTAAAAGCACTGTGGATTTTGTTATCAACGTAGAATTGGAACCACTTGCTCAACCTCCAAAATTTGCCTCTCTCCTGAGGGTTTCTTTTGTGAAGATACCTGAATGTGGCATCCTTGAATCCATTAGAGCAAGTTCGCCTGTTGAGTCACAAGAGCGGCAAGACATGATCGACTTGGAGTTGCAAAAGTACTTTGAAGTCGATAGGTATTTGTCGAAGGGAGATGTTTTTGGAATTAAAATAAGCTGGAACTGCAATTCCCCCATTTGCATTCCTTGCAATCAAAGATCATTAAATAAAAATGACAACCTTGTCTGCTTCAAGGTTGTTGGTATGGAACCTTCAGATGAGCCGGTTTTCCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCACTCCCTCCAGATTTGTTGATTGGTGGACAAGCAGAAGGACCTGTGCCTTTGCAAGGGGACACTGTGAACATCTTGGCTTCAATACTTACACCAACTTTTTGTCCGTCAGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTATTGTATGGCTTGGCAGGGTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTCGTCAACTGGGCGTGCATGTGGTGGAATATAACTGTCATGATCTAATGGTGTCTGATAGGCAATCTGTTGCTTTAGCACAAGCTTTCAAGACAGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGTGATTCACAATCGCCTGAGGTTTCACCACATGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAGTCAATGAACATGGTGATAGTAGTGTCCCAGGGAAATCAAACAGTGAATCTGTGGAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCCTATTGATTGCTGCTGCAGACAGTTCAGAAGGTCTGCCTTCGACTATCAGACGCTGTTTTAGCCACGAAATAAGCATGGGGGCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACTAATTCAGAAGCTTTAGTAAAAGAAATAGTTGGGCAGACATCTGGTTACATGCCCAGGGATATATGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAAGTAGACAAAGATGTACATGATGATGTAGGTAGTTCCCTTAGTTCCAAGATGGCAGAGGACAACAATCACGGGAAAGTTTCACCTCAGATTACTGGAAAAGAAGACTTGTTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCGAATGTGAAATGGGAGGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGGTTAGGTATAAGAATAAAAATTAAAAAGTGCTTCCGGAGAGTCGAAATTAAATTTGAATGCAGTTCTCTCCTATGTTCAACATGGAAGCTATGAGCTATCAATAATGGATTCTGCTAAGAAGAGATTGAATAGGATCTTTCCGCTAGAGCAAGAAGATATGTCCCTTCTAACCATAAAAAATATGTGGTTTTCCTCTGCAGTATCGCTACATATGTTGGCTCTTTCTGTTGAATGGAAAATAATGCGTGCTTCTCTTTCAAGTCACTTTTCTTTTCTGAGAAATTCCCGTGCCTTCTTGCATCTCTATTTTAATACTTATTAAATTAATGTTACCTGGGGCATACTGTTTATTGTCTGTAATTTCTGAAAATCTGATTCAT

Coding sequences of Glyma.19g208300

Limit To All Plant Sequences

>Glyma.19g208300.1 sequence-type=CDS polypeptide=Glyma.19g208300.1.p locus=Glyma.19g208300 ID=Glyma.19g208300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAAAGGAGGAGAAAGCCTCTGATACTGTGTTCCACCAAACATCTCATAAATTCCACTGTTCCAACCAACAACCTCTTCCCCCATGAATCTCTTCCCACTTTCCGTTTACCCGTTGGGATTCTCCGATTCTCCAACCCCGCAAACCCCTCTCTCGACCACTCTGCACTTCTCGCTCTCTCCACTAGTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCTCCGGTTTTGGTCAAGAATGTTGATACGAATACACAGAAAATTGCAGTGGCTATTGCTCTTGATCCACCAGGCACCGCCACTAATATGGACTCACCCTCTTCTTCAAATTCTCGAATAATGCTTGTTTTTCCTTCTTGTGATTTCCCTTCTAGTGGTTCTGTGTTAGATGATCAAGTAGCTTATATATCTCCTCTTTTAGCCTTTAACCTTAACTTGCACGTGACATGCTTAAAATCTATTCTTCACCACGGGCAAGATGCTTTAGCTTCTTATTTCAAAAGGGGTGATGAGGATGCCACTAAAAGCACTGTGGATTTTGTTATCAACGTAGAATTGGAACCACTTGCTCAACCTCCAAAATTTGCCTCTCTCCTGAGGGTTTCTTTTGTGAAGATACCTGAATGTGGCATCCTTGAATCCATTAGAGCAAGTTCGCCTGTTGAGTCACAAGAGCGGCAAGACATGATCGACTTGGAGTTGCAAAAGTACTTTGAAGTCGATAGGTATTTGTCGAAGGGAGATGTTTTTGGAATTAAAATAAGCTGGAACTGCAATTCCCCCATTTGCATTCCTTGCAATCAAAGATCATTAAATAAAAATGACAACCTTGTCTGCTTCAAGGTTGTTGGTATGGAACCTTCAGATGAGCCGGTTTTCCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCACTCCCTCCAGATTTGTTGATTGGTGGACAAGCAGAAGGACCTGTGCCTTTGCAAGGGGACACTGTGAACATCTTGGCTTCAATACTTACACCAACTTTTTGTCCGTCAGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTATTGTATGGCTTGGCAGGGTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTCGTCAACTGGGCGTGCATGTGGTGGAATATAACTGTCATGATCTAATGGTGTCTGATAGGCAATCTGTTGCTTTAGCACAAGCTTTCAAGACAGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGTGATTCACAATCGCCTGAGGTTTCACCACATGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAGTCAATGAACATGGTGATAGTAGTGTCCCAGGGAAATCAAACAGTGAATCTGTGGAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCCTATTGATTGCTGCTGCAGACAGTTCAGAAGGTCTGCCTTCGACTATCAGACGCTGTTTTAGCCACGAAATAAGCATGGGGGCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACTAATTCAGAAGCTTTAGTAAAAGAAATAGTTGGGCAGACATCTGGTTACATGCCCAGGGATATATGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAAGTAGACAAAGATGTACATGATGATGTAGGTAGTTCCCTTAGTTCCAAGATGGCAGAGGACAACAATCACGGGAAAGTTTCACCTCAGATTACTGGAAAAGAAGACTTGTTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCGAATGTGAAATGGGAGGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGTTACCTCTCCTGCATAAAGATCTATTTTCATCTGGATTACGTAAGCGATCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAGTGCTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGAGACATTTTCCAGAAGGCCAGATCAGCACGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTTGCACCAGCTCGAGGTGCCTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGATGGGTTAAGTGATTCCACACAGGATCTGTTTATTATAGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTCTGCGCCCTGGTCGATTTGACAAACTGCTATATGTCGGAGTTAACTCCGATGCATCTTACAGGGAGCGGGTCCTGAAAGCTCTTACCCGAAAGTTCAAATTGCATGAAGATGTCTCACTTTACTCCATAGCAAAAAAATGTCCACCAAACTTCACTGGTGCAGACATGTATGCTTTGTGTGCAGATGCTTGGTTCCATGCTGCAAAGCGCAAAGTTTTGAGAGCAAATCCAGAGTCTTCCAGCCAAGATAATGAAGCAGATTCTGTTGTTGTGGAATACAATGATTTCATCCAGGTCTTAGAAGAGCTGTCGCCTTCCCTCTCCATGGCTGAGCTCAACAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAATGA

>Glyma.19g208300.2 sequence-type=CDS polypeptide=Glyma.19g208300.2.p locus=Glyma.19g208300 ID=Glyma.19g208300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGAAAGGAGGAGAAAGCCTCTGATACTGTGTTCCACCAAACATCTCATAAATTCCACTGTTCCAACCAACAACCTCTTCCCCCATGAATCTCTTCCCACTTTCCGTTTACCCGTTGGGATTCTCCGATTCTCCAACCCCGCAAACCCCTCTCTCGACCACTCTGCACTTCTCGCTCTCTCCACTAGTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCTCCGGTTTTGGTCAAGAATGTTGATACGAATACACAGAAAATTGCAGTGGCTATTGCTCTTGATCCACCAGGCACCGCCACTAATATGGACTCACCCTCTTCTTCAAATTCTCGAATAATGCTTGTTTTTCCTTCTTGTGATTTCCCTTCTAGTGGTTCTGTGTTAGATGATCAAGTAGCTTATATATCTCCTCTTTTAGCCTTTAACCTTAACTTGCACGTGACATGCTTAAAATCTATTCTTCACCACGGGCAAGATGCTTTAGCTTCTTATTTCAAAAGGGGTGATGAGGATGCCACTAAAAGCACTGTGGATTTTGTTATCAACGTAGAATTGGAACCACTTGCTCAACCTCCAAAATTTGCCTCTCTCCTGAGGGTTTCTTTTGTGAAGATACCTGAATGTGGCATCCTTGAATCCATTAGAGCAAGTTCGCCTGTTGAGTCACAAGAGCGGCAAGACATGATCGACTTGGAGTTGCAAAAGTACTTTGAAGTCGATAGGTATTTGTCGAAGGGAGATGTTTTTGGAATTAAAATAAGCTGGAACTGCAATTCCCCCATTTGCATTCCTTGCAATCAAAGATCATTAAATAAAAATGACAACCTTGTCTGCTTCAAGGTTGTTGGTATGGAACCTTCAGATGAGCCGGTTTTCCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCACTCCCTCCAGATTTGTTGATTGGTGGACAAGCAGAAGGACCTGTGCCTTTGCAAGGGGACACTGTGAACATCTTGGCTTCAATACTTACACCAACTTTTTGTCCGTCAGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTATTGTATGGCTTGGCAGGGTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTCGTCAACTGGGCGTGCATGTGGTGGAATATAACTGTCATGATCTAATGGTGTCTGATAGGCAATCTGTTGCTTTAGCACAAGCTTTCAAGACAGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGTGATTCACAATCGCCTGAGGTTTCACCACATGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAGTCAATGAACATGGTGATAGTAGTGTCCCAGGGAAATCAAACAGTGAATCTGTGGAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCCTATTGATTGCTGCTGCAGACAGTTCAGAAGGTCTGCCTTCGACTATCAGACGCTGTTTTAGCCACGAAATAAGCATGGGGGCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACTAATTCAGAAGCTTTAGTAAAAGAAATAGTTGGGCAGACATCTGGTTACATGCCCAGGGATATATGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAAGTAGACAAAGATGTACATGATGATGTAGGTAGTTCCCTTAGTTCCAAGATGGCAGAGGACAACAATCACGGGAAAGTTTCACCTCAGATTACTGGAAAAGAAGACTTGTTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCGAATGTGAAATGGGAGGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGGTTAGGTATAAGAATAAAAATTAA

Predicted protein sequences of Glyma.19g208300

Limit To All Plant Sequences

>Glyma.19g208300.1.p sequence-type=predicted peptide transcript=Glyma.19g208300.1 locus=Glyma.19g208300 ID=Glyma.19g208300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVERRRKPLILCSTKHLINSTVPTNNLFPHESLPTFRLPVGILRFSNPANPSLDHSALLALSTSLLKTLSITSGSPVLVKNVDTNTQKIAVAIALDPPGTATNMDSPSSSNSRIMLVFPSCDFPSSGSVLDDQVAYISPLLAFNLNLHVTCLKSILHHGQDALASYFKRGDEDATKSTVDFVINVELEPLAQPPKFASLLRVSFVKIPECGILESIRASSPVESQERQDMIDLELQKYFEVDRYLSKGDVFGIKISWNCNSPICIPCNQRSLNKNDNLVCFKVVGMEPSDEPVFRVNNTLTALVLVGSSPSALPPDLLIGGQAEGPVPLQGDTVNILASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVARQLGVHVVEYNCHDLMVSDRQSVALAQAFKTARRYSPAILLLRHFDVFRDSQSPEVSPHDQRGNTSEVASVIRKFTEPVNEHGDSSVPGKSNSESVEKNAEKTSGHQVLLIAAADSSEGLPSTIRRCFSHEISMGALTEEQRAEMLFQSLQSVSGLLSNTNSEALVKEIVGQTSGYMPRDICALIADAGANLFPRNNAKVDKDVHDDVGSSLSSKMAEDNNHGKVSPQITGKEDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLRANPESSSQDNEADSVVVEYNDFIQVLEELSPSLSMAELNKYEQLRDQFEGTSK*

>Glyma.19g208300.2.p sequence-type=predicted peptide transcript=Glyma.19g208300.2 locus=Glyma.19g208300 ID=Glyma.19g208300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVERRRKPLILCSTKHLINSTVPTNNLFPHESLPTFRLPVGILRFSNPANPSLDHSALLALSTSLLKTLSITSGSPVLVKNVDTNTQKIAVAIALDPPGTATNMDSPSSSNSRIMLVFPSCDFPSSGSVLDDQVAYISPLLAFNLNLHVTCLKSILHHGQDALASYFKRGDEDATKSTVDFVINVELEPLAQPPKFASLLRVSFVKIPECGILESIRASSPVESQERQDMIDLELQKYFEVDRYLSKGDVFGIKISWNCNSPICIPCNQRSLNKNDNLVCFKVVGMEPSDEPVFRVNNTLTALVLVGSSPSALPPDLLIGGQAEGPVPLQGDTVNILASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVARQLGVHVVEYNCHDLMVSDRQSVALAQAFKTARRYSPAILLLRHFDVFRDSQSPEVSPHDQRGNTSEVASVIRKFTEPVNEHGDSSVPGKSNSESVEKNAEKTSGHQVLLIAAADSSEGLPSTIRRCFSHEISMGALTEEQRAEMLFQSLQSVSGLLSNTNSEALVKEIVGQTSGYMPRDICALIADAGANLFPRNNAKVDKDVHDDVGSSLSSKMAEDNNHGKVSPQITGKEDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQVRYKNKN*

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