Glyma.19g200100

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Report for Sequence Feature Glyma.19g200100

Feature Type:	gene_model
Chromosome:	Gm19
Start:	45711253
stop:	45714039
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.19g200100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G31400.1	AT	damaged DNA binding;DNA-directed DNA polymerases	JGI	N/A	IEA
GO:0000070	GO-bp	mitotic sister chromatid segregation	EnsemblGenomes	N/A	IEA
GO:0006281	GO-bp	DNA repair	EnsemblGenomes	N/A	IEA
GO:0007062	GO-bp	sister chromatid cohesion	EnsemblGenomes	N/A	IEA
GO:0045132	GO-bp	meiotic chromosome segregation	EnsemblGenomes	N/A	IEA
GO:0051301	GO-bp	cell division	EnsemblGenomes	N/A	IEA
GO:0016407	GO-mf	acetyltransferase activity	EnsemblGenomes	N/A	IEA
KOG3014	KOG	Protein involved in establishing cohesion between sister chromatids during DNA replication	JGI	N/A	IEA
PTHR11076	Panther	DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER	JGI	N/A	IEA
PTHR11076:SF4	Panther		JGI	N/A	IEA

Expression Patterns of Glyma.19g200100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g200100 not represented in the dataset	Glyma.19g200100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.19g200100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma19g38730	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.19g200100

Limit To All Plant Sequences

>Glyma.19g200100.2 sequence-type=transcript locus=Glyma.19g200100 ID=Glyma.19g200100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATTTCAAATGCAGTGGGCTTTCTGATGATGCATGGTTGTTACATGGGTTCAAATTACTAAGATTAGGATTTTCTGTAGAGAAGCAGTGGAAGGATGTTGAATTGGATTCAGTTTTTACTTAAAATATGAAACATTGAAACACTGGAAATATTGTAGATGAGAGAGTTGACATGGCTCTTAGTTTTCAGAATTTCAGACGCACTTGATGCCTTTATTAGTCATGCTTAATGTGGCTATTGATTATTAAAGATGTTGTTGTTGGACATTGTAGTTTTATAATGTTACTTATTTGCACTTATCATATAATTTGAACAAATAATTTTACATCCATAATCCTCGCAGATGCAGTCCAAGATTAGCGCTTTCTTCAAATCTACTACCTCCGATTCCTCTTCCGTCTCTGCCGACAATGACGACGACTTGTCCATCTGGGAGAAGCAGCAACACCATATCATCAACACCTACACCCGAAGGCCTCCAAACCCTAACGCCGTTATTCCTTCGGTGGTCAAAAACAAGAAGAGGAGCTACGCCCAATTCCACCTCGATTTCGGCCAATCCGATTTCCTCTTACGCGCCTGTTCCACTTGCGGAATCAATTTCACTCCCGGCGACCCAGACGACGAGAAATCCCACAACCACTTTCACAAATCCTACACCCAGGGGATACAATTCAGAGGTTGGACCAAAGAAAATGTTATCCCTCTTCCCACCCTCGAAGCGGGTCGAATCATTTTGGTTTCGGAGATCGACCTCACTTCTCACAGAAGAATAGTTGAGCAGGTCGTGAGTATGATGGAAATTGAGCTTGGGTGTGGATGGATCCTTCACGACCTCTTTAAGGTGTATCTGTTTGTTTCTCTTCACAGGGTTGTTGGGTGCCTCGTTGCAGAACCAATTGAAAAGGCATTCAAAGTTGTGTCTGGCTCTCCTGATAGCGTGAAGAAAAGGGAAGTGAGGACGCGTTCTACCACTCTTCGGTTTGGGAATGTTATTTTCCAAAGGGAGGTTGAAAAAAAAGTTGCTTCCTTGAGTGATTCTGAAAGGATGGAAGGTGCAATCTTCTGTGATAGCAAACCAACCACCGCTGCTTGTGGCATTAGGGCCATTTGGGTTGCTCCCTCTAACAGAAGAAAAGGAATTGCAAGCAAATTGCTTGATGCCGTGAGGAAGAGTTTCTGCAAGGATCTTGAGCTTGAACGTTCTCAACTAGCATTCTCTCAGCCAACCTCAGCTGGAAAGGCATTGGCAACAAGTTACACTGGCACTGGATCATTCTTGGCGTATTAAAGCCAACAAAACTATTGGTTACTACTACTATTTCGTACTGACAGATAAAGCCATGTTTAGATTAGTGATTACTTCTATTGACTGTTAATTAACAAAAACATAAGCTATTATTCTTGTAAAGTATAACATTTTTAGCCCATATAAGTATGAATCTTTGATTTCGTTGCTTCTTATTGTTGTAAGCCTTTTGTCATCCCGAATTGATTTACCCATTAGGTTCTTGAGTATCAGAGTTGTGGCGTGTTTGGAATATCGCCAGTTTTAAGACTACTACAACTGTGGTTGAAGCATTTTAATATATGTTTGGTTTTGTTCT

>Glyma.19g200100.3 sequence-type=transcript locus=Glyma.19g200100 ID=Glyma.19g200100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATTTCAAATGCAGTGGGCTTTCTGATGATGCATGGTTGTTACATGGGTTCAAATTACTAAGATTAGGATTTTCTGTAGAGAAGCAGTGGAAGGATGTTGAATTGGATTCAGTTTTTACTTAAAATATGAAACATTGAAACACTGGAAATATTGTAGATGAGAGAGTTGACATGGCTCTTAGTTTTCAGAATTTCAGACGCACTTGATGCCTTTATTAGTCATGCTTAATGTGGCTATTGATTATTAAAGATGTTGTTGTTGGACATTGTAGTTTTATAATGTTACTTATTTGCACTTATCATATAATTTGAACAAATAATTTTACATCCATAATCCTCGCAGATGCAGTCCAAGATTAGCGCTTTCTTCAAATCTACTACCTCCGATTCCTCTTCCGTCTCTGCCGACAATGACGACGACTTGTCCATCTGGGAGAAGCAGCAACACCATATCATCAACACCTACACCCGAAGGCCTCCAAACCCTAACGCCGTTATTCCTTCGGTGGTCAAAAACAAGAAGAGGAGCTACGCCCAATTCCACCTCGATTTCGGCCAATCCGATTTCCTCTTACGCGCCTGTTCCACTTGCGGAATCAATTTCACTCCCGGCGACCCAGACGACGAGAAATCCCACAACCACTTTCACAAATCCTACACCCAGGGGATACAATTCAGAGGTTGGACCAAAGAAAATGTTATCCCTCTTCCCACCCTCGAAGCGGGTCGAATCATTTTGGTTTCGGAGATCGACCTCACTTCTCACAGAAGAATAGTTGAGCAGGTCGTGAGTATGATGGAAATTGAGCTTGGGTGTGGATGGATCCTTCACGACCTCTTTAAGGTGTATCTGTTTGTTTCTCTTCACAGGGTTGTTGGGTGCCTCGTTGCAGAACCAATTGAAAAGGCATTCAAAGTTGTGTCTGGCTCTCCTGATAGCGTGAAGAAAAGGGAAGTGAGGACGCGTTCTACCACTCTTCGGTTTGGGAATGTTATTTTCCAAAGGGAGGTTGAAAAAAAAGTTGCTTCCTTGAGTGATTCTGAAAGGATGGAAGGTGCAATCTTCTGTGATAGCAAACCAACCACCGCTGCTTGTGGCATTAGGGCCATTTGGGTTGCTCCCTCTAACAGAAGAAAAGGAATTGCAAGCAAATTGCTTGATGCCGTGAGGTAAAGTAAATTAAATTTGGCTTAACTTGCCATTTCTGATGGGCAATTAAAGCCC

Coding sequences of Glyma.19g200100

Limit To All Plant Sequences

>Glyma.19g200100.1 sequence-type=CDS polypeptide=Glyma.19g200100.1.p locus=Glyma.19g200100 ID=Glyma.19g200100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTAGGAGATTATGAAGTTGCCTTGTCAAATTATCGCCTAATTTCCACCGAATACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGATGCAGTCCAAGATTAGCGCTTTCTTCAAATCTACTACCTCCGATTCCTCTTCCGTCTCTGCCGACAATGACGACGACTTGTCCATCTGGGAGAAGCAGCAACACCATATCATCAACACCTACACCCGAAGGCCTCCAAACCCTAACGCCGTTATTCCTTCGGTGGTCAAAAACAAGAAGAGGAGCTACGCCCAATTCCACCTCGATTTCGGCCAATCCGATTTCCTCTTACGCGCCTGTTCCACTTGCGGAATCAATTTCACTCCCGGCGACCCAGACGACGAGAAATCCCACAACCACTTTCACAAATCCTACACCCAGGGGATACAATTCAGAGGTTGGACCAAAGAAAATGTTATCCCTCTTCCCACCCTCGAAGCGGGTCGAATCATTTTGGTTTCGGAGATCGACCTCACTTCTCACAGAAGAATAGTTGAGCAGGTCGTGAGTATGATGGAAATTGAGCTTGGGTGTGGATGGATCCTTCACGACCTCTTTAAGGTGTATCTGTTTGTTTCTCTTCACAGGGTTGTTGGGTGCCTCGTTGCAGAACCAATTGAAAAGGCATTCAAAGTTGTGTCTGGCTCTCCTGATAGCGTGAAGAAAAGGGAAGTGAGGACGCGTTCTACCACTCTTCGGTTTGGGAATGTTATTTTCCAAAGGGAGGTTGAAAAAAAAGTTGCTTCCTTGAGTGATTCTGAAAGGATGGAAGGTGCAATCTTCTGTGATAGCAAACCAACCACCGCTGCTTGTGGCATTAGGGCCATTTGGGTTGCTCCCTCTAACAGAAGAAAAGGAATTGCAAGCAAATTGCTTGATGCCGTGAGGAAGAGTTTCTGCAAGGATCTTGAGCTTGAACGTTCTCAACTAGCATTCTCTCAGCCAACCTCAGCTGGAAAGGCATTGGCAACAAGTTACACTGGCACTGGATCATTCTTGGCGTATTAA

>Glyma.19g200100.2 sequence-type=CDS polypeptide=Glyma.19g200100.2.p locus=Glyma.19g200100 ID=Glyma.19g200100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGTCCAAGATTAGCGCTTTCTTCAAATCTACTACCTCCGATTCCTCTTCCGTCTCTGCCGACAATGACGACGACTTGTCCATCTGGGAGAAGCAGCAACACCATATCATCAACACCTACACCCGAAGGCCTCCAAACCCTAACGCCGTTATTCCTTCGGTGGTCAAAAACAAGAAGAGGAGCTACGCCCAATTCCACCTCGATTTCGGCCAATCCGATTTCCTCTTACGCGCCTGTTCCACTTGCGGAATCAATTTCACTCCCGGCGACCCAGACGACGAGAAATCCCACAACCACTTTCACAAATCCTACACCCAGGGGATACAATTCAGAGGTTGGACCAAAGAAAATGTTATCCCTCTTCCCACCCTCGAAGCGGGTCGAATCATTTTGGTTTCGGAGATCGACCTCACTTCTCACAGAAGAATAGTTGAGCAGGTCGTGAGTATGATGGAAATTGAGCTTGGGTGTGGATGGATCCTTCACGACCTCTTTAAGGTGTATCTGTTTGTTTCTCTTCACAGGGTTGTTGGGTGCCTCGTTGCAGAACCAATTGAAAAGGCATTCAAAGTTGTGTCTGGCTCTCCTGATAGCGTGAAGAAAAGGGAAGTGAGGACGCGTTCTACCACTCTTCGGTTTGGGAATGTTATTTTCCAAAGGGAGGTTGAAAAAAAAGTTGCTTCCTTGAGTGATTCTGAAAGGATGGAAGGTGCAATCTTCTGTGATAGCAAACCAACCACCGCTGCTTGTGGCATTAGGGCCATTTGGGTTGCTCCCTCTAACAGAAGAAAAGGAATTGCAAGCAAATTGCTTGATGCCGTGAGGAAGAGTTTCTGCAAGGATCTTGAGCTTGAACGTTCTCAACTAGCATTCTCTCAGCCAACCTCAGCTGGAAAGGCATTGGCAACAAGTTACACTGGCACTGGATCATTCTTGGCGTATTAA

>Glyma.19g200100.3 sequence-type=CDS polypeptide=Glyma.19g200100.3.p locus=Glyma.19g200100 ID=Glyma.19g200100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGTCCAAGATTAGCGCTTTCTTCAAATCTACTACCTCCGATTCCTCTTCCGTCTCTGCCGACAATGACGACGACTTGTCCATCTGGGAGAAGCAGCAACACCATATCATCAACACCTACACCCGAAGGCCTCCAAACCCTAACGCCGTTATTCCTTCGGTGGTCAAAAACAAGAAGAGGAGCTACGCCCAATTCCACCTCGATTTCGGCCAATCCGATTTCCTCTTACGCGCCTGTTCCACTTGCGGAATCAATTTCACTCCCGGCGACCCAGACGACGAGAAATCCCACAACCACTTTCACAAATCCTACACCCAGGGGATACAATTCAGAGGTTGGACCAAAGAAAATGTTATCCCTCTTCCCACCCTCGAAGCGGGTCGAATCATTTTGGTTTCGGAGATCGACCTCACTTCTCACAGAAGAATAGTTGAGCAGGTCGTGAGTATGATGGAAATTGAGCTTGGGTGTGGATGGATCCTTCACGACCTCTTTAAGGTGTATCTGTTTGTTTCTCTTCACAGGGTTGTTGGGTGCCTCGTTGCAGAACCAATTGAAAAGGCATTCAAAGTTGTGTCTGGCTCTCCTGATAGCGTGAAGAAAAGGGAAGTGAGGACGCGTTCTACCACTCTTCGGTTTGGGAATGTTATTTTCCAAAGGGAGGTTGAAAAAAAAGTTGCTTCCTTGAGTGATTCTGAAAGGATGGAAGGTGCAATCTTCTGTGATAGCAAACCAACCACCGCTGCTTGTGGCATTAGGGCCATTTGGGTTGCTCCCTCTAACAGAAGAAAAGGAATTGCAAGCAAATTGCTTGATGCCGTGAGGTAA

Predicted protein sequences of Glyma.19g200100

Limit To All Plant Sequences

>Glyma.19g200100.1.p sequence-type=predicted peptide transcript=Glyma.19g200100.1 locus=Glyma.19g200100 ID=Glyma.19g200100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLGDYEVALSNYRLISTEYKIDKAWKRYAGVQMQSKISAFFKSTTSDSSSVSADNDDDLSIWEKQQHHIINTYTRRPPNPNAVIPSVVKNKKRSYAQFHLDFGQSDFLLRACSTCGINFTPGDPDDEKSHNHFHKSYTQGIQFRGWTKENVIPLPTLEAGRIILVSEIDLTSHRRIVEQVVSMMEIELGCGWILHDLFKVYLFVSLHRVVGCLVAEPIEKAFKVVSGSPDSVKKREVRTRSTTLRFGNVIFQREVEKKVASLSDSERMEGAIFCDSKPTTAACGIRAIWVAPSNRRKGIASKLLDAVRKSFCKDLELERSQLAFSQPTSAGKALATSYTGTGSFLAY*

>Glyma.19g200100.2.p sequence-type=predicted peptide transcript=Glyma.19g200100.2 locus=Glyma.19g200100 ID=Glyma.19g200100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQSKISAFFKSTTSDSSSVSADNDDDLSIWEKQQHHIINTYTRRPPNPNAVIPSVVKNKKRSYAQFHLDFGQSDFLLRACSTCGINFTPGDPDDEKSHNHFHKSYTQGIQFRGWTKENVIPLPTLEAGRIILVSEIDLTSHRRIVEQVVSMMEIELGCGWILHDLFKVYLFVSLHRVVGCLVAEPIEKAFKVVSGSPDSVKKREVRTRSTTLRFGNVIFQREVEKKVASLSDSERMEGAIFCDSKPTTAACGIRAIWVAPSNRRKGIASKLLDAVRKSFCKDLELERSQLAFSQPTSAGKALATSYTGTGSFLAY*

>Glyma.19g200100.3.p sequence-type=predicted peptide transcript=Glyma.19g200100.3 locus=Glyma.19g200100 ID=Glyma.19g200100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQSKISAFFKSTTSDSSSVSADNDDDLSIWEKQQHHIINTYTRRPPNPNAVIPSVVKNKKRSYAQFHLDFGQSDFLLRACSTCGINFTPGDPDDEKSHNHFHKSYTQGIQFRGWTKENVIPLPTLEAGRIILVSEIDLTSHRRIVEQVVSMMEIELGCGWILHDLFKVYLFVSLHRVVGCLVAEPIEKAFKVVSGSPDSVKKREVRTRSTTLRFGNVIFQREVEKKVASLSDSERMEGAIFCDSKPTTAACGIRAIWVAPSNRRKGIASKLLDAVR*

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