SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g187900

Feature Type:gene_model
Chromosome:Gm19
Start:45041122
stop:45049953
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g187900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G36720.1AT JGI N/AIEA
2.3.1.48EC histone acetyltransferase JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR24098PantherFam OUTER SEGMENT 5 JGI N/AIEA
PF00628Pfam PHD-finger JGI N/AIEA
PF16135Pfam Tify domain binding domain JGI N/AIEA

Gene model name correspondences to Glyma.19g187900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g37190 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g187900
>Glyma.19g187900.1 sequence-type=CDS polypeptide=Glyma.19g187900.1.p locus=Glyma.19g187900 id=Glyma.19g187900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGCCGCCGTGAAGCCGGAGACGGAATACGCGGCCGTTTCGACGGATCAGCCTCGGAAAGTTTCGGTGGTGAATGGTTACATTGTCTACACTCGCGCCAAGAGGTCACTGGATTCGTGCAACGGTTTTTCAGAACACGCGGAATTGAAGGATAACGCCGAGGTTGAAGTTAAAACGGAGAACGGAGAGTGTGAGAAGCTGAAAAATGAGTCCACAGAGGTGGTTGCGAGGACGCGCAAGCGGAGCCGGCGATCGGCGTTGGAAGCGAAGGTTGAGTGTTGTGATCAGATGGTTGTGAGTGAGACGGAACAAGTAGTTGCGAATGGCGGAAGCGGAATCAACGGTGCATTGGGAGCTCCGAGGAATAAGATGGAGTTGAAGATGTCGAAGAAGATTGTGGTCAACAGGAAGCCTATGACTGTGAAAAAGCTCTTTGATACAGGTTTTCTTGATGGCGTTTCCGTGGTTTACATGGGCGGCATTAAGAAGGCTTCGGGATTACGAGGTGTGATTAGAGATGGGGGAATATTGTGCTCGTGCTGTCTATGCAATGGACGCAGGGTTATTCCACCTTCCCAATTCGAGATCCATGCTTGCAAACAATATAGGAGAGCTGCGCAGTATATTTGCCTCGAAAATGGGAAGAGCCTGCTTGATCTGTTGAGAGCATGCAGGGGAGCTACCCTGCATACTTTGGAGGTGACAGTTCAAAATTTTGTTTGTTCTCCACATGAAGAAAGATACTTTACATGTAAAAGGTGCAAAGGATGTTTCCCTTCTTCGTTTGTGGAAAGAGTGGGGCCTATATGCCGTTCTTGTGTGGAATCAAGGAAGTCTGAAGAAAGTTCAAATAACGTAGTTGGCAAAAGAGTTAGGTCCCCTAGACCAGTGGTTCTTTCCAACCCATCCAGTACTTCTGAGCTGTCTGTCTCTTCACAAGTTAAGAGACACAGGAAGAAAAGAACAAAGGCATCAAAAAGGATTATCTGTTCAAATACTTCCAAGAATGCTTCTGTGGCTGTTCTACCCCGGAAGAAAAATTTGTTGAAGATGAAAAAGAAGTCGCTGTCAGTAAAGTTGAAGTCCCCCAAAAAAACTTTAAATTTGAAATCTAATAAGAGTCAATGGAGGATAACTAAGAAGGATCAGCGATTGCATAAGTTAGTTTTTGAAGAAAATGGATTGCCTGATGGAACTGAAGTAGCTTATTATGCTCGTGGACAGAAATTGCTTGAAGGTTTCAAAATGGGCTCTGGAATTGTTTGTCGATGCTGCAACACTGAGATCAGCCCTTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAAGAAACCTTATGCATACATTTACACGTCAAATGGGGTGTCTCTCCATGAGTTGGCAATATCTCTCTCAAAAGATAGAAAATACTCTGCAAAGGACAATGATGATCTATGCATTGTTTGTTGGGATGGTGGTAATCTATTGCTTTGTGATGGATGCCCAAGAGCATTTCATAAAGAATGTGCAGCTCTATCAAGTATTCCACGTGGTGACTGGTACTGCCAATTTTGCCAAAACATGTTCCAGAGAGAAAAGTTTGTGGCGCACAACGCCAATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAACAGATTGCCAATAGATGCATTCGCATAGTCAAAGACATTGAAGCTGATCTTAGTAGCTGTGCTTTATGCAGGGGTGTTGATTTCAGCAGATCTGGGTTTGGTCCACGCACAATAATACTCTGCGATCAGTGTGAAAAGGAATATCATGTTGGTTGTTTGAGGGATCACAAGATGGCATATTTAAAGGAACTGCCAGAAGGTAATTGGCTTTGTTGCAATGATTGCACAAGAATACACTCTACTTTGGAGAATCTTTTGGTTAAGGGGGCTGAGAGACTCCCTGAATCTCTCTTGGGTGTTATAAAGAAGAAGCAAGAGGAAAAAGGATTAGAACCCATCATTGATGTAAGATGGAGGCTTCTTAATGGCAAAATTGCTTCTCCTGAAACTAGACCATTGCTTTTGGAGGCTGTTTCAATCTTTCATGAATGCTTTAATCCTATAGTTGATGCAGCTAGTGGACGTGACCTTATTCCAGCCATGGTTTATGGGAGGAATGTGCGAGGTCAGGAGTTTGGAGGAATGTATTGTGCATTACTAATAGTCAATTCATCTGTGGTATCTGCGGGCATGCTTAGAATTTTTGGCTCAGATGTTGCTGAACTCCCTTTAGTTGCAACGAGTAATGGGAACCATGGAAAGGGCTACTTCCAAACACTCTTCTCCTGCATCGAGAGGCTGCTGGCTTTCTTGAATGTGAAGAATCTTGTACTGCCAGCTGCAGAAGAAGCAGAATCAATATGGACTGATAAATTTGGGTTTAGCAAGATGAATCCAGATGAGCTCACCAACTATAGAAAGAACTGCCATCAGATGGTAAGTTTCAAAGGGACCAATATGCTGCATAAAATGGTACCTTCGTGTCGGGTCATCAATAATCAATCATGA
Predicted protein sequences of Glyma.19g187900
>Glyma.19g187900.1.p sequence-type=predicted peptide transcript=Glyma.19g187900.1 locus=Glyma.19g187900 id=Glyma.19g187900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDAAVKPETEYAAVSTDQPRKVSVVNGYIVYTRAKRSLDSCNGFSEHAELKDNAEVEVKTENGECEKLKNESTEVVARTRKRSRRSALEAKVECCDQMVVSETEQVVANGGSGINGALGAPRNKMELKMSKKIVVNRKPMTVKKLFDTGFLDGVSVVYMGGIKKASGLRGVIRDGGILCSCCLCNGRRVIPPSQFEIHACKQYRRAAQYICLENGKSLLDLLRACRGATLHTLEVTVQNFVCSPHEERYFTCKRCKGCFPSSFVERVGPICRSCVESRKSEESSNNVVGKRVRSPRPVVLSNPSSTSELSVSSQVKRHRKKRTKASKRIICSNTSKNASVAVLPRKKNLLKMKKKSLSVKLKSPKKTLNLKSNKSQWRITKKDQRLHKLVFEENGLPDGTEVAYYARGQKLLEGFKMGSGIVCRCCNTEISPSQFEVHAGWASRKKPYAYIYTSNGVSLHELAISLSKDRKYSAKDNDDLCIVCWDGGNLLLCDGCPRAFHKECAALSSIPRGDWYCQFCQNMFQREKFVAHNANAVAAGRVEGVDPIEQIANRCIRIVKDIEADLSSCALCRGVDFSRSGFGPRTIILCDQCEKEYHVGCLRDHKMAYLKELPEGNWLCCNDCTRIHSTLENLLVKGAERLPESLLGVIKKKQEEKGLEPIIDVRWRLLNGKIASPETRPLLLEAVSIFHECFNPIVDAASGRDLIPAMVYGRNVRGQEFGGMYCALLIVNSSVVSAGMLRIFGSDVAELPLVATSNGNHGKGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESIWTDKFGFSKMNPDELTNYRKNCHQMVSFKGTNMLHKMVPSCRVINNQS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo