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Report for Sequence Feature Glyma.19g186400

Feature Type:gene_model
Chromosome:Gm19
Start:44498441
stop:44500784
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g186400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G09920.1AT phosphatidyl inositol monophosphate 5 kinase JGI N/AIEA
GO:0016310GO-bp phosphorylation EnsemblGenomesN/AIEA
GO:0046488GO-bp phosphatidylinositol metabolic process EnsemblGenomesN/AIEA
GO:0046488GO-bp phosphatidylinositol metabolic process JGI N/AIEA
GO:0046854GO-bp phosphatidylinositol phosphorylation EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0016301GO-mf kinase activity EnsemblGenomesN/AIEA
GO:0016307GO-mf phosphatidylinositol phosphate kinase activity EnsemblGenomesN/AIEA
GO:0016307GO-mf phosphatidylinositol phosphate kinase activity JGI N/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
PTHR23086Panther PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE JGI N/AIEA
PTHR23086:SF6Panther JGI N/AIEA
PF01504PFAM Phosphatidylinositol-4-phosphate 5-Kinase JGI N/AIEA
PWY-6351SoyCyc9 D-myo-inositol (1,4,5)-trisphosphate biosynthesis Plant Metabolic Network ISS
PWY-6352SoyCyc9 3-phosphoinositide biosynthesis Plant Metabolic Network ISS
GN7V-54134SoyCyc9-rxn 1-phosphatidylinositol-4-phosphate 5-kinase Plant Metabolic Network ISS

Expression Patterns of Glyma.19g186400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g186400 not represented in the dataset
Glyma.19g186400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g186400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g37031 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g186400
>Glyma.19g186400.1 sequence-type=CDS polypeptide=Glyma.19g186400.1.p locus=Glyma.19g186400 ID=Glyma.19g186400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACTACAGCCTTCTTCTAAGTGTTCACTGTCGAGCTCCCCAGCATCTGCGTTCTCTCGTTTCACACAACCAAAGTAGAAGTGTGGATGGATTAGCAATGCTTGCAGAGGAAGACCCTCTGGAGGATGAAGTATCCTATCCACAAGGCCTTGTTCTAGTTCCTCGAGGAGCAGATGATGACAGTGTTGTTGTTGGCTCACACATGAGGGGTAGCCGGTTGCGAGCTTCATCTGCTGGTGACGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATTCAGCTTGGTGTGAACATGCCATCAAGGGCAGAGCAGATTTCAGAAAAACAAGAAAAGCAAATGTTCCATGAGGTGTACGATGTGGTGCTGTACCTTGGTATCATTGACATATTGCAGAACTACAACATGACTAAGAGGATTGAACATGCATATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGCTGTAGACCCTACGTTCTACTCTCGTCGCTTCCTGGAATTTATTCAGAAGGTGTTTCCACCAAATGCAACGACAGGTTAA
Predicted protein sequences of Glyma.19g186400
>Glyma.19g186400.1.p sequence-type=predicted peptide transcript=Glyma.19g186400.1 locus=Glyma.19g186400 ID=Glyma.19g186400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDYSLLLSVHCRAPQHLRSLVSHNQSRSVDGLAMLAEEDPLEDEVSYPQGLVLVPRGADDDSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQISEKQEKQMFHEVYDVVLYLGIIDILQNYNMTKRIEHAYKSLQFDSLSISAVDPTFYSRRFLEFIQKVFPPNATTG*






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