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Report for Sequence Feature Glyma.19g184800

Feature Type:gene_model
Chromosome:Gm19
Start:44331344
stop:44340234
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g184800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G03430.1AT phosphoadenosine phosphosulfate (PAPS) reductase family protein JGI N/AIEA
GO:0006747GO-bp FAD biosynthetic process EnsemblGenomesN/AIEA
GO:0006777GO-bp Mo-molybdopterin cofactor biosynthetic process JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0003919GO-mf FMN adenylyltransferase activity EnsemblGenomesN/AIEA
KOG2644 KOG 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes JGI N/AIEA
PTHR23293Panther FAD SYNTHETASE-RELATED (FMN ADENYLYLTRANSFERASE) JGI N/AIEA
PF00994PFAM Probable molybdopterin binding domain JGI N/AIEA
PF01507PFAM Phosphoadenosine phosphosulfate reductase family JGI N/AIEA
RIBOSYN2-PWYSoyCyc9 flavin biosynthesis I (bacteria and plants) Plant Metabolic Network ISS
GN7V-61020SoyCyc9-rxn FAD synthetase Plant Metabolic Network ISS

Expression Patterns of Glyma.19g184800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.19g184800
ParalogEvidenceComments
Glyma.03g184200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.19g184800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g36860 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g184800
>Glyma.19g184800.1 sequence-type=CDS polypeptide=Glyma.19g184800.1.p locus=Glyma.19g184800 ID=Glyma.19g184800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATCGATAAGGCAATTAGAGAGTGTGACGATCGAAGACTTCAGACCAAGTACAACAACGCTACCTATGTTGTTCAGAGAGCTTTGGCTTTGTATTCTATTGAGGAGGTTGCCTTCAGTTTCAATGGAGGAAAGGATTCAACGGTTTTGTTGCACATACTCAGGGCTGGCTATTTCTTGCACAAAAAGGGGCAAAATAGTGCAAATGGGGATCTAAAAGATTTTCCAATTCGAACAATATATTTTGAGAGTCCTTGTGCATTCCCAGAAATCAATTCATTTACCTATGATACTGCTGCCACCTATGGGTTGCAAATTGACACCATTAGCTTAGATTTCAAGTCTGGTTTGGAGGCTTTGCTAAAGGAAAAACCGATTCGAGCTATCTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGTCAAGAACAATTCTCCCCTAGTTCGCCTGGGTGGCCACCTTTCATGAGGGTGAATCCCATTTTAGATTGGTCATACAGAGATGTGTGGGCCTTCCTTTTAACTTGCAAGGTGAACTATTGCAGCCTTTATGATCAAGGTTATACTTCAATTGGGAGCATATACGACACAGTTCCCAACTCATTATTATGCATTAGCAATTCTTCCAATAAATTCAAACCTGCGTATTTACTTGCTGACGGAAGATTAGAGAGGGCAGGGAGGGCTAAAAGGCCATCTACTTCAACTGGTGGACAACATCCTGCAGAGAGCAATGGCCTGACTAGCCAGGATTCACTTAAAAACAGCATGCTCACAGCATCAATCATTGCTGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAGTTGGGACCTTATTTGTGTAGGAAACTGCATTGCATTGGTTGGTCTGTGTTTCAACATTCTGTTGTGCACAACAATATAGATTCTGTGGCCGAAGAAGTTGAGAGACAAAAATCTAAAAGTGATATGGTATTTATATATGGAGGTGTAGGTCCACTGCATTCAGATGTTAGCATAGCAGGCATTGCAAAAGCTTTTGGTGTTCGTTTGGCTCCAGATGAAGAATTTGAAGAATATCTCAGGCATATTATTGGTGATCAATGTACTGGTGACCGGAATGAGATGGCTCAATTGCCTGAGGGCATAACTGAATTATGGCATCATGACAAATTGTCTGTGCCCTTGATCAAGTGTGAAAATGTAATAATTCTTAGTGCAACAAATGTTCCAGAGCTGGAAAAGCAGTGGGACTGTTGGATTGAATTAGCAAAATCTAGTGATCTACTAGCATTGCTGGAACCATATGTATCAAAGGACGTGACAACTAATCTGTCAGATGTTGAAATTGCTCAACCTCTATCAAAGCTTTGCCTTGAATTTCCAGACCTTTATATTGGTTGTTACCGCAAAGCCAGATATGGATCTCTTATAGTAAGCTTCAAAGGAAAGGACCTAACACGCATTGAATCAGCTATAAAAGCATTACACAAGAAGTTTCAACCCAGTGCTTTCGTTGAGATGAACTAG
Predicted protein sequences of Glyma.19g184800
>Glyma.19g184800.1.p sequence-type=predicted peptide transcript=Glyma.19g184800.1 locus=Glyma.19g184800 ID=Glyma.19g184800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEIDKAIRECDDRRLQTKYNNATYVVQRALALYSIEEVAFSFNGGKDSTVLLHILRAGYFLHKKGQNSANGDLKDFPIRTIYFESPCAFPEINSFTYDTAATYGLQIDTISLDFKSGLEALLKEKPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVNYCSLYDQGYTSIGSIYDTVPNSLLCISNSSNKFKPAYLLADGRLERAGRAKRPSTSTGGQHPAESNGLTSQDSLKNSMLTASIIAVGDEILFGIVEDQLGPYLCRKLHCIGWSVFQHSVVHNNIDSVAEEVERQKSKSDMVFIYGGVGPLHSDVSIAGIAKAFGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELWHHDKLSVPLIKCENVIILSATNVPELEKQWDCWIELAKSSDLLALLEPYVSKDVTTNLSDVEIAQPLSKLCLEFPDLYIGCYRKARYGSLIVSFKGKDLTRIESAIKALHKKFQPSAFVEMN*






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