SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g175300

Feature Type:gene_model
Chromosome:Gm19
Start:43974445
stop:43977956
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g175300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G09550.1AT JGI N/AIEA
KOG0502 KOG Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) JGI N/AIEA
KOG0508 KOG Ankyrin repeat protein JGI N/AIEA
KOG4412 KOG 26S proteasome regulatory complex, subunit PSMD10 JGI N/AIEA
PTHR24177PantherFam CASKIN JGI N/AIEA
PF12796Pfam Ankyrin repeats (3 copies) JGI N/AIEA
PF13962Pfam Domain of unknown function JGI N/AIEA

Gene model name correspondences to Glyma.19g175300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g35890 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g175300
>Glyma.19g175300.1 sequence-type=CDS polypeptide=Glyma.19g175300.1.p locus=Glyma.19g175300 id=Glyma.19g175300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCATAACCACCATCATCGTCATCACAATCACAATCATGCTCTTCACACCACCCCTCTCTCCGAGCCCACCACCCCCACCACCCCTCGCCCCACCCTCTTCCTCTCCACCTCCGGCAAGGCCCTCCTCCTCTCCAACTCCAACAAGCGCCTCGACACCCCCAGGAAGAAATATGTCAAGCAGGTCACCGGCCGCCACAACGACACCGAGCTCCACCTCGCCTCGCAGCGCGGCGACGTGGACTCTGTCCGCCACGTCCTCGCCGAGATCGACTCCATCATGATGGGGAGCTTGGAGTTCGATGCGGAGTTGGCGGACATCAGGTCCGCCATCTTCAACGAGGTGAATGATCTGGGAGAAACCGCCCTCTTCACCGCCGCGGAAAAGGGCCACCTCGACGTCGTCCGGGAGCTCCTCCCTTACACCACCGATGATGCGCTTTCCTCCAAAAACCGCTCCGGCTTTGACACCTTGCACATCGCCGCTAGCAATGGTCATCTTGCCATTGTGCAGGCGCTACTAGACCATGACCCCGGTTTGATTAAGACGTTTGCGCAGTCAAATGCAACTCCTCTAATCTCTGCAGCTACACGAGGGCATGCAGATGTTGTTGAAGAGTTGTTGTCTCGAGATCCTACTCAGTTGGAGATGACTAGGTCCAACGGAAAAAATGCTCTCCATTTAGCTGCACGCCAGGGACATGTAAGTGTTGTAAAGATACTGCTGCGGAAGGATCCACAACTTGCTCGAAGGACTGATAAGAAAGGACAAACTGCACTACACATGGCTGTCAAAGGCGTTAGTTGTGAAGTGGTGAAGCTGATTCTTGCTGCGGATACAGCCATTGTCATGCTTCCTGACAAGTTTGGTAATACTGCATTGCATGTAGCCACAAGGAAAAAGAGGACAGAGATAGTGCATGAGCTGTTGCTTCTACCTGACACCAATGTGAATACATTGACAAGAGATCACAAGACAGCTCTTGACCTTGCGGAGGGGCTTCCGATATCTGAGGAAATTCTTGAGATCAAAGAGTGTCTGATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAACCAAGGGACGAGCTAAGGAAAACCATGACACAAATCAAGAAAGATGTGTATTTTCAGCTGGAACAGGCTCGAAAAACAAACAAGAACGTGAGTGGGATTGCTAATGAGCTACGCAAGCTGCACAGAGCTGGAATCAACAATGCCGCAAACTCAGTAACGGTGGTTGCTGTGTTATTTGCAGCGGTTGCATTTGCAGCAATGTTCACAGTTCCTGGTGGGGACAATGATCATGGGGTGGCAGTGATGGTACAAACTGCGTCTTTCAAGGCCTTCTTCATATCCAATGCCATTGCACTCTTCACATCATTAAGTGTGGTGGTGGTTCAAATCACAATTGTTAGAGGGGAGATAAAGGCTGAAAGAAGGGTTGTGGAGGTGATCAACAAGATGATGTGGTTAGCCTCTGTCTGCACCTCTGTTTCGTTCATTTCAGCATCTTATATAGTAGTTGGTCGACGCAGCCAGTGGGCTGCAATACTTGTTACCATTGTAGGGGCCATTGTAATGGGTGGTGTTCTTGGTACCATGACATACTATGTGGTGAAATCCAAACGCTCCCGAAGGATGAGGAGGAAGAAAGGGAAGTTCTCTAAGACAGGAACACACTCGTGGCGCCTTTCGAGTTCGGATGATTCGGAAATAAATCCAATCTATGCCATTTGA
Predicted protein sequences of Glyma.19g175300
>Glyma.19g175300.1.p sequence-type=predicted peptide transcript=Glyma.19g175300.1 locus=Glyma.19g175300 id=Glyma.19g175300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDHNHHHRHHNHNHALHTTPLSEPTTPTTPRPTLFLSTSGKALLLSNSNKRLDTPRKKYVKQVTGRHNDTELHLASQRGDVDSVRHVLAEIDSIMMGSLEFDAELADIRSAIFNEVNDLGETALFTAAEKGHLDVVRELLPYTTDDALSSKNRSGFDTLHIAASNGHLAIVQALLDHDPGLIKTFAQSNATPLISAATRGHADVVEELLSRDPTQLEMTRSNGKNALHLAARQGHVSVVKILLRKDPQLARRTDKKGQTALHMAVKGVSCEVVKLILAADTAIVMLPDKFGNTALHVATRKKRTEIVHELLLLPDTNVNTLTRDHKTALDLAEGLPISEEILEIKECLIRYGAVKANDLNQPRDELRKTMTQIKKDVYFQLEQARKTNKNVSGIANELRKLHRAGINNAANSVTVVAVLFAAVAFAAMFTVPGGDNDHGVAVMVQTASFKAFFISNAIALFTSLSVVVVQITIVRGEIKAERRVVEVINKMMWLASVCTSVSFISASYIVVGRRSQWAAILVTIVGAIVMGGVLGTMTYYVVKSKRSRRMRRKKGKFSKTGTHSWRLSSSDDSEINPIYAI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo