SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g161100

Feature Type:gene_model
Chromosome:Gm19
Start:42630797
stop:42634456
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g161100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G14550.1AT IAA14,SLR JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
K14484KEGG Plant hormone signal transduction JGI N/AIEA
PTHR31734PantherFam AUXIN-RESPONSIVE PROTEIN IAA17 JGI N/AIEA
PF02309Pfam AUX/IAA family JGI N/AIEA

Proteins Associated with Glyma.19g161100
LocusGene SymbolProtein Name
AUX28 Auxin-regulated protein 28
IAA56 Indole-3-Acetic Acid Responsive Gene 56

Gene model name correspondences to Glyma.19g161100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g34380 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g161100
>Glyma.19g161100.1 sequence-type=CDS polypeptide=Glyma.19g161100.1.p locus=Glyma.19g161100 id=Glyma.19g161100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGTTGGCCTCAAGAAGGAGAACATGGGGTTTGAGGAAACTGAGTTAAGGCTTGGACTGCCTGGAAACGGAGGCACTGAAGAAGTGCTCATCAGGAAGAGGGGTTTCTCTGAGACTGAAACTGGTCATGAAGATGAGTCTGCCACCACTGTGGATTTGATGCTTAATCTTTCTTCTAAGGAGGCCGCAACCACTGCTGCTGCTGCTGCAGATCCAACTGATAAGCACAAGACTTTGCCTAAGGAGAAGACCCTTCTGCCAGCAGATCCTGCTAAGCCTCCAGCCAAGACGCAGGTGGTGGGTTGGCCACCTGTGCGGTCCTTCCGGAAGAACATGTTGGCTGTGCAAAAGAGCGTTGGAGAAGAGAGCGAGAAGAACAGCAGCCCTAATGCAAGCTTTGTCAAAGTTAGCATGGATGGAGCACCTTACCTTCGCAAAGTGGACTTGAAGATGTACAAGAGTTACCGAGAGCTCTCTGATTCTTTAGGCAAAATGTTCAGCTCCTTCACCTTTGGCAATTGTGAATCCCAAGGAATGAAGGATTTCATGAATGAGAGCAAGCTGAATGATCTCTTGAACAGCTCTGATTATGTCCCAACCTATGAGGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGCATCATGAAAGGAAAGGAGGCTATTGGTCTTGGTCTTGCACCAAGAGCCATGGCAAAATGCAAGAACAGGAGCTAG
Predicted protein sequences of Glyma.19g161100
>Glyma.19g161100.1.p sequence-type=predicted peptide transcript=Glyma.19g161100.1 locus=Glyma.19g161100 id=Glyma.19g161100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEVGLKKENMGFEETELRLGLPGNGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo