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Report for Sequence Feature Glyma.19g161000

Feature Type:gene_model
Chromosome:Gm19
Start:42615422
stop:42617123
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g161000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G43700.1AT ATAUX2-11,IAA4 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
K14484KEGG Plant hormone signal transduction JGI N/AIEA
PTHR31734PantherFam AUXIN-RESPONSIVE PROTEIN IAA17 JGI N/AIEA
PTHR31734:SF8PantherFam AUXIN-RESPONSIVE PROTEIN IAA24 JGI N/AIEA
PF02309Pfam AUX/IAA family JGI N/AIEA

Proteins Associated with Glyma.19g161000
LocusGene SymbolProtein Name
IAA55 Indole-3-Acetic Acid Responsive Gene 55

Gene model name correspondences to Glyma.19g161000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g34370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g161000
>Glyma.19g161000.1 sequence-type=CDS polypeptide=Glyma.19g161000.1.p locus=Glyma.19g161000 id=Glyma.19g161000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGAGCTTTGAAACTGAGCTGAATCTTAAGGCCACAGAGTTGAGGTTGGGATTACCCGGCTGTGATGAAACTCATGACAAAAGTTCATCCAGTAGTGGATCTGTTGTTAGAAGCAACAAGAGATCTTCACCAGAACCCAGTGTGGAAGAGTCCAGGTGCAACTCTAATGGTTCTTCAGATTCTACCACCACAAGTGATCATGATGAAGACAGTGTCCAACCTGCAAAGGTACAAGTAGTGGGGTGGCCACCAATTAGATCTTTTAGGAAGAACAGTCTGCAACAACAGAAGAAGGTGGAGCAGCAGGGTGATGGAAGTGGAACGTATTTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGGAAGATAGATCTGAAGGTTTACAATAGCTACCCAGAACTCCTCATGGCCTTGCAAAATTTGTTCAAGTGCACATTTGGTGAATATTCAGAGAGGGAAGGTTACAATGGATCTGAATACGCTCCTACTTATGAAGACAAGGATGGTGACTGGATGCTGGTTGGAGATGTTCCATGGAACATGTTTGTATCCTCCTGCAAGAGGCTGAAAATAATCAAAGGATCAGAAGCAAAGGGGTTGGGTTGTTTGTGA
Predicted protein sequences of Glyma.19g161000
>Glyma.19g161000.1.p sequence-type=predicted peptide transcript=Glyma.19g161000.1 locus=Glyma.19g161000 id=Glyma.19g161000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGSFETELNLKATELRLGLPGCDETHDKSSSSSGSVVRSNKRSSPEPSVEESRCNSNGSSDSTTTSDHDEDSVQPAKVQVVGWPPIRSFRKNSLQQQKKVEQQGDGSGTYLKVSMAGAPYLRKIDLKVYNSYPELLMALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLKIIKGSEAKGLGCL*






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