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Report for Sequence Feature Glyma.19g143900

Feature Type:gene_model
Chromosome:Gm19
Start:40944904
stop:40953824
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g143900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G57800.2AT JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR12565PantherFam STEROL REGULATORY ELEMENT-BINDING PROTEIN JGI N/AIEA
PTHR12565:SF112PantherFam TRANSCRIPTION FACTOR BHLH48 JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA

Proteins Associated with Glyma.19g143900
LocusGene SymbolProtein Name
PTF1 transcription factor bHLH48-like

Gene model name correspondences to Glyma.19g143900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g32570 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g143900
>Glyma.19g143900.1 sequence-type=CDS polypeptide=Glyma.19g143900.1.p locus=Glyma.19g143900 id=Glyma.19g143900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACCAAGCTCCGGGAGGATTGCGCGGATCCGTTCACCACGGCGCCACGCTCGAGTCAATTCAATTCAACGAAGAAATTCAGGGACTCATGGCGCCGGCGCCGGAAAACGCGAGCTCGTTCACCGCGCTGCTTGAACTCCCGCCGACGCAGGCGGTGGAGCTCCTTCACTCGCCGGAATCTGACAGCGCTCGGAAACCGCCTAATTGCCATGTCAGCGCGAACCAGAAACCCTACCTGCTCAATTCTTTCGGCAGCAATTTGACCTTCCCTTCCAACGCCGCCTTAATCGAACGCGCCGCGAAGTTCTCCGTGTTCGCCGGCGAGAACTCGCCGCCTCCGCCGGGGGAGGCGCGCCTGATTCCAGCAGGAACCGGTTCGACTTTGGACAGAGTGAAGAACGAGCCGCAAGAGACCGATTCGAACCCGTGCTCGAGCTCGAGGCTGGGTTGCATTTCGGATCCCGCGGTTGAAAACAACATTCAGAGGACCGCCAAGAGAAAGGAGCGAGAGAAGAAGGCTAAAGGATCGTCGAAGAAGCGTAAGAGCGCCGCCGATGAGACATCCGGTGACGGCGAGAAGCTTCCCTACGTCCATGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTGGCAGAAAGGGCTAGGAGAGAGAAGATCAATGCTCGCATGAAGCTTTTGCAAGAGCTGGTCCCAGGCTGCGACAAGATATCAGGAACGGCAATGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAGCGTCAAGTGGAGATCTTATCAATGAAACTGGCAGCAGTTAACCCAAGAATGGATTTCAGCCTCGACAGTTTATTGGCTACTGATGGGGCATCTCTAGTGGATAGTAACTTACCTAGCATGGTGACACCTCTCATGTGGCCAGAAATCCCACTCAATGGCAACCGGCAGCATTATCAACAGCAGTGGCAATTGGATGCATTCCACCAACCGCTATGGGAGAGGGAAGAAGTCAACCATAATTTCATGACTCCGGAAAACTCACTTTTGAGTTATGACTCATCGGCAAACTCAGCGTCTCTGCACTTAAATCAATTGAAGATGGAGCTCTGA
Predicted protein sequences of Glyma.19g143900
>Glyma.19g143900.1.p sequence-type=predicted peptide transcript=Glyma.19g143900.1 locus=Glyma.19g143900 id=Glyma.19g143900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDQAPGGLRGSVHHGATLESIQFNEEIQGLMAPAPENASSFTALLELPPTQAVELLHSPESDSARKPPNCHVSANQKPYLLNSFGSNLTFPSNAALIERAAKFSVFAGENSPPPPGEARLIPAGTGSTLDRVKNEPQETDSNPCSSSRLGCISDPAVENNIQRTAKRKEREKKAKGSSKKRKSAADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRMDFSLDSLLATDGASLVDSNLPSMVTPLMWPEIPLNGNRQHYQQQWQLDAFHQPLWEREEVNHNFMTPENSLLSYDSSANSASLHLNQLKMEL*






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